RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 LRIT1Q9P2V4 623 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 DKK4Q9UBT3 224 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 LHX6Q9UPM6 363 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 PCDHA3Q9Y5H8 950 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 RNF215Q9Y6U7 377 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 TLX3O43711 291 aaPredicted RBP17.55■□□□□ 0.4
COL6A1-204ENST00000486023 NOBOXO60393 691 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 CTNNA1P35221 906 aaKnown RBP17.55■□□□□ 0.4
COL6A1-204ENST00000486023 PPM1FP49593 454 aaPredicted RBP17.55■□□□□ 0.4
COL6A1-204ENST00000486023 MAZP56270 477 aaKnown RBP17.55■□□□□ 0.4
COL6A1-204ENST00000486023 NOMO1Q15155 1222 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 C14orf28Q4W4Y0 310 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 AADACL2Q6P093 401 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 NRROSQ86YC3 692 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 GPR156Q8NFN8 814 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 GPBAR1Q8TDU6 330 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 GFM1Q96RP9 751 aaKnown RBP17.55■□□□□ 0.4
COL6A1-204ENST00000486023 TRIB3Q96RU7 358 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 LYSMD1Q96S90 227 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 SPATA16Q9BXB7 569 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 FOXP3Q9BZS1 431 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 WDR70Q9NW82 654 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 TRIM10Q9UDY6 481 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 SATB2Q9UPW6 733 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 SLC17A4Q9Y2C5 497 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 LAMA5O15230 3695 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 PKD1L2Q7Z442 2459 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 CHD6Q8TD26 2715 aa17.55■□□□□ 0.4
COL6A1-204ENST00000486023 CELSR3Q9NYQ7 3312 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 A0A0U1RQJ8 604 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 FGF1P05230 155 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 PYGLP06737 847 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 FECHP22830 423 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 TEAD1P28347 426 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 RBL1P28749 1068 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 CD68P34810 354 aaPredicted RBP17.54■□□□□ 0.4
COL6A1-204ENST00000486023 ACTN2P35609 894 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 ACTR1BP42025 376 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 RWDD2BP57060 319 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 ACTR1AP61163 376 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 KIF5AQ12840 1032 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 AMZ1Q400G9 498 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 ZNF648Q5T619 568 aaPredicted RBP17.54■□□□□ 0.4
COL6A1-204ENST00000486023 OGFOD3Q6PK18 319 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 LRRC69Q6ZNQ3 347 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 CHST15Q7LFX5 561 aaPredicted RBP17.54■□□□□ 0.4
COL6A1-204ENST00000486023 NLRP8Q86W28 1048 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 GALNT13Q8IUC8 556 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 ZNF567Q8N184 647 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 IPMKQ8NFU5 416 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 OR6C4Q8NGE1 309 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 PATE1Q8WXA2 126 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 OR2M4Q96R27 311 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 WDR24Q96S15 920 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 HERPUD2Q9BSE4 406 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 OSBPL8Q9BZF1 889 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 LRRN3Q9H3W5 708 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 EPB41L5Q9HCM4 733 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 BPIFA1Q9NP55 256 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 TRNAU1APQ9NX07 287 aaKnown RBP17.54■□□□□ 0.4
COL6A1-204ENST00000486023 FAM153AQ9UHL3 310 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 ATXN7L1Q9ULK2 861 aaPredicted RBP17.54■□□□□ 0.4
COL6A1-204ENST00000486023 ZNF711Q9Y462 761 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 ENTPD2Q9Y5L3 495 aa17.54■□□□□ 0.4
COL6A1-204ENST00000486023 OAS3Q9Y6K5 1087 aaKnown RBP17.54■□□□□ 0.4
COL6A1-204ENST00000486023 APC2O95996 2303 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 GRID2IPA4D2P6 1211 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 RHPN2P1A8MT19 583 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 FADS2P1A8MWK0 482 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 AURKAO14965 403 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 MTSS1O43312 755 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 ECEL1O95672 775 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 NDST3O95803 873 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 IVLP07476 585 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 GLB1P16278 677 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 RBMS1P29558 406 aaKnown RBP17.53■□□□□ 0.4
COL6A1-204ENST00000486023 ALDH4A1P30038 563 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 CETN2P41208 172 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 WNT3AP56704 352 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 OTUD4Q01804 1114 aaKnown RBP17.53■□□□□ 0.4
COL6A1-204ENST00000486023 CCDC173Q0VFZ6 552 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 PPP2R5EQ16537 467 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 CERCAMQ5T4B2 595 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 BBS12Q6ZW61 710 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 PEX26Q7Z412 305 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 CCNJLQ8IV13 435 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 WDR48Q8TAF3 677 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 FGF11Q92914 225 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 EID2BQ96D98 161 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 CALR3Q96L12 384 aaKnown RBP17.53■□□□□ 0.4
COL6A1-204ENST00000486023 QKIQ96PU8 341 aaKnown RBP eCLIP17.53■□□□□ 0.4
COL6A1-204ENST00000486023 CDH19Q9H159 772 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 POLR1BQ9H9Y6 1135 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 MAGEE1Q9HCI5 957 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 RSPH14Q9UHP6 348 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 AMFRQ9UKV5 643 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 PACSIN2Q9UNF0 486 aaPredicted RBP17.53■□□□□ 0.4
COL6A1-204ENST00000486023 SPO11Q9Y5K1 396 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 ST14Q9Y5Y6 855 aa17.53■□□□□ 0.4
COL6A1-204ENST00000486023 A0A1W2PQM1 296 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms