RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 PDCD6IPQ8WUM4 868 aaKnown RBP12.95□□□□□ -0.34
HDAC6-227ENST00000485102 RTP4Q96DX8 246 aa12.95□□□□□ -0.34
HDAC6-227ENST00000485102 COX14Q96I36 57 aa12.95□□□□□ -0.34
HDAC6-227ENST00000485102 ABCG8Q9H221 673 aa12.95□□□□□ -0.34
HDAC6-227ENST00000485102 TRIT1Q9H3H1 467 aaKnown RBP12.95□□□□□ -0.34
HDAC6-227ENST00000485102 ANKMY1Q9P2S6 941 aa12.95□□□□□ -0.34
HDAC6-227ENST00000485102 TMEM184BQ9Y519 407 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-227ENST00000485102 TTC24A2A3L6 582 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-227ENST00000485102 H3BRJ5 948 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 MAN1A1P33908 653 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 GPR1P46091 355 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 CDH6P55285 790 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 FOXK1P85037 733 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 PTSQ03393 145 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 ABHD18Q0P651 414 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 ARMC12Q5T9G4 340 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 MARC1Q5VT66 337 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 ALG1LQ6GMV1 187 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 TMCO3Q6UWJ1 677 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 CEACAM20Q6UY09 585 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 TSPAN33Q86UF1 283 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 NRSN1Q8IZ57 195 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 NLGN4XQ8N0W4 816 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 NDUFAF2Q8N183 169 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 TEX26Q8N6G2 289 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 NLGN4YQ8NFZ3 816 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-227ENST00000485102 OR10G6Q8NH81 332 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 EXD1Q8NHP7 514 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 SLC37A2Q8TED4 501 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 SH3KBP1Q96B97 665 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 AP2M1Q96CW1 435 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 IQCDQ96DY2 449 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 TRIM7Q9C029 511 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 EPN3Q9H201 632 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 EPB41L1Q9H4G0 881 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 SARS2Q9NP81 518 aaKnown RBP12.94□□□□□ -0.34
HDAC6-227ENST00000485102 TMEM9Q9P0T7 183 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 VPS18Q9P253 973 aa12.94□□□□□ -0.34
HDAC6-227ENST00000485102 USP9XQ93008 2570 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-227ENST00000485102 EFCAB7A8K855 629 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 CBFA2T2O43439 604 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 DUX1O43812 170 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 FTLP02792 175 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-227ENST00000485102 CES1P23141 567 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 SERPINB6P35237 376 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 ARL4AP40617 200 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 EPHA4P54764 986 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 MC1RQ01726 317 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 MAP7Q14244 749 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 DENND2CQ68D51 928 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 ANKS6Q68DC2 871 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 FAM129CQ86XR2 697 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 PTRH1Q86Y79 214 aaKnown RBP12.93□□□□□ -0.34
HDAC6-227ENST00000485102 AOPEPQ8N6M6 819 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 NSMCE1Q8WV22 266 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 KIAA1143Q96AT1 154 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-227ENST00000485102 AHCYL2Q96HN2 611 aaKnown RBP12.93□□□□□ -0.34
HDAC6-227ENST00000485102 SLC38A3Q99624 504 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 HSD3B7Q9H2F3 369 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 SUDS3Q9H7L9 328 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-227ENST00000485102 GPN2Q9H9Y4 310 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-227ENST00000485102 ETNK2Q9NVF9 386 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 DNPEPQ9ULA0 475 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 PLEKHM1Q9Y4G2 1056 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 SCINQ9Y6U3 715 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 NOTCH2Q04721 2471 aa12.93□□□□□ -0.34
HDAC6-227ENST00000485102 A0A0J9YYE9 177 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 NKX2-8O15522 239 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 DNAJC6O75061 913 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 TRBC1P01850 177 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 PDHA1P08559 390 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 AMPD1P23109 780 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 MPSTP25325 297 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 IL1R2P27930 398 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 PRKCIP41743 596 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 MMP13P45452 471 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 STC1P52823 247 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 SKIDA1Q1XH10 827 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 LRRC66Q68CR7 880 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 IYDQ6PHW0 289 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 TIPARPQ7Z3E1 657 aaKnown RBP12.92□□□□□ -0.34
HDAC6-227ENST00000485102 GALNT13Q8IUC8 556 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 AVL9Q8NBF6 648 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 C9orf43Q8TAL5 461 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-227ENST00000485102 TEKT4Q8WW24 435 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 APOBEC4Q8WW27 367 aaKnown RBP12.92□□□□□ -0.34
HDAC6-227ENST00000485102 SCAMP4Q969E2 229 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 FATE1Q969F0 183 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 CSPG4P5Q96PW8 444 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 LYSMD1Q96S90 227 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 RMI1Q9H9A7 625 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 MRPL47Q9HD33 250 aaKnown RBP12.92□□□□□ -0.34
HDAC6-227ENST00000485102 AIPL1Q9NZN9 384 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 CNOT8Q9UFF9 292 aaKnown RBP12.92□□□□□ -0.34
HDAC6-227ENST00000485102 AMACRQ9UHK6 382 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 TMEM98Q9Y2Y6 226 aa12.92□□□□□ -0.34
HDAC6-227ENST00000485102 KIR2DS5A0A0G2JLQ3 304 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 A0A0G2JNG1 304 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 LOC101059948A0A1B0GTJ6 334 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 A6NCN8 305 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms