RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 GOLGA6DP0CG33 693 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 CTSEP14091 401 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 STIP1P31948 543 aaKnown RBP17.9■□□□□ 0.46
HDAC6-225ENST00000483506 CHRNA4P43681 627 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 GDF10P55107 478 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 SMAD1Q15797 465 aaKnown RBP17.9■□□□□ 0.46
HDAC6-225ENST00000483506 PARP6Q2NL67 630 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 DEFB133Q30KQ1 61 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 KCTD11Q693B1 232 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 PDPK2PQ6A1A2 396 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 GKN2Q86XP6 184 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 GPR26Q8NDV2 337 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 DTX3LQ8TDB6 740 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 ATG4AQ8WYN0 398 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 PLEKHG4BQ96PX9 1271 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 TMEM121Q9BTD3 319 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 ZSCAN5AQ9BUG6 496 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 SCNM1Q9BWG6 230 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 CYP4F12Q9HCS2 524 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 EVA1BQ9NVM1 165 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 GOLGA6AQ9NYA3 693 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 ZKSCAN5Q9Y2L8 839 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 AKAP13Q12802 2813 aa17.89■□□□□ 0.45
HDAC6-225ENST00000483506 AGTP01019 485 aa17.89■□□□□ 0.45
HDAC6-225ENST00000483506 GP1BAP07359 652 aa17.89■□□□□ 0.45
HDAC6-225ENST00000483506 BPIP17213 487 aa17.89■□□□□ 0.45
HDAC6-225ENST00000483506 DUSP3P51452 185 aaPredicted RBP17.89■□□□□ 0.45
HDAC6-225ENST00000483506 P3H1Q32P28 736 aa17.89■□□□□ 0.45
HDAC6-225ENST00000483506 DRICH1Q6PGQ1 229 aaPredicted RBP17.89■□□□□ 0.45
HDAC6-225ENST00000483506 ARHGEF18Q6ZSZ5 1173 aa17.89■□□□□ 0.45
HDAC6-225ENST00000483506 TMPRSS7Q7RTY8 843 aa17.89■□□□□ 0.45
HDAC6-225ENST00000483506 RD3Q7Z3Z2 195 aa17.89■□□□□ 0.45
HDAC6-225ENST00000483506 SLC25A41Q8N5S1 370 aa17.89■□□□□ 0.45
HDAC6-225ENST00000483506 TRAM1L1Q8N609 369 aa17.89■□□□□ 0.45
HDAC6-225ENST00000483506 FICDQ9BVA6 458 aa17.89■□□□□ 0.45
HDAC6-225ENST00000483506 ARNT2Q9HBZ2 717 aa17.89■□□□□ 0.45
HDAC6-225ENST00000483506 TRNAU1APQ9NX07 287 aaKnown RBP17.89■□□□□ 0.45
HDAC6-225ENST00000483506 VPS18Q9P253 973 aa17.89■□□□□ 0.45
HDAC6-225ENST00000483506 FEZ2Q9UHY8 353 aaPredicted RBP17.89■□□□□ 0.45
HDAC6-225ENST00000483506 SUFUQ9UMX1 484 aa17.89■□□□□ 0.45
HDAC6-225ENST00000483506 JRKLQ9Y4A0 524 aa17.89■□□□□ 0.45
HDAC6-225ENST00000483506 ZNF106Q9H2Y7 1883 aaKnown RBP17.88■□□□□ 0.45
HDAC6-225ENST00000483506 DAB2P98082 770 aa17.88■□□□□ 0.45
HDAC6-225ENST00000483506 MSLNQ13421 630 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-225ENST00000483506 CCNG2Q16589 344 aa17.88■□□□□ 0.45
HDAC6-225ENST00000483506 ZDHHC20Q5W0Z9 365 aa17.88■□□□□ 0.45
HDAC6-225ENST00000483506 GALNT15Q8N3T1 639 aa17.88■□□□□ 0.45
HDAC6-225ENST00000483506 GPBAR1Q8TDU6 330 aa17.88■□□□□ 0.45
HDAC6-225ENST00000483506 PTCD2Q8WV60 388 aaKnown RBP17.88■□□□□ 0.45
HDAC6-225ENST00000483506 SCG3Q8WXD2 468 aaKnown RBP17.88■□□□□ 0.45
HDAC6-225ENST00000483506 TMEM168Q9H0V1 697 aa17.88■□□□□ 0.45
HDAC6-225ENST00000483506 CARS2Q9HA77 564 aaKnown RBP17.88■□□□□ 0.45
HDAC6-225ENST00000483506 IL17CQ9P0M4 197 aa17.88■□□□□ 0.45
HDAC6-225ENST00000483506 KLK13Q9UKR3 277 aa17.88■□□□□ 0.45
HDAC6-225ENST00000483506 MSRB2Q9Y3D2 182 aa17.88■□□□□ 0.45
HDAC6-225ENST00000483506 PLXNB3Q9ULL4 1909 aa17.88■□□□□ 0.45
HDAC6-225ENST00000483506 EME2A4GXA9 379 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-225ENST00000483506 PPFIA2O75334 1257 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 METTL18O95568 372 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 SPINK2P20155 84 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 POLD2P49005 469 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 NR0B2Q15466 257 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 DENND5AQ6IQ26 1287 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 DHRS13Q6UX07 377 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 TRIM74Q86UV6 250 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 TMPRSS12Q86WS5 348 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 SLC35F3Q8IY50 421 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 ARL10Q8N8L6 244 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 MAIP1Q8WWC4 291 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 C1orf54Q8WWF1 131 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 GLMNQ92990 594 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 C19orf43Q9BQ61 176 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 TBL1YQ9BQ87 522 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 SPATA16Q9BXB7 569 aa17.87■□□□□ 0.45
HDAC6-225ENST00000483506 TMEM121BQ9BXQ6 578 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-225ENST00000483506 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.87■□□□□ 0.45
HDAC6-225ENST00000483506 FRYQ5TBA9 3013 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 ASXL3Q9C0F0 2248 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 INPP4BO15327 924 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 DNAJC6O75061 913 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 FGGP02679 453 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 SLC4A1P02730 911 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 RPIAP49247 311 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 E2F1Q01094 437 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 OLIG2Q13516 323 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 TAF1AQ15573 450 aaPredicted RBP17.86■□□□□ 0.45
HDAC6-225ENST00000483506 PYCR3Q53H96 274 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 ZNF569Q5MCW4 686 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 OGFOD3Q6PK18 319 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 CCNI2Q6ZMN8 369 aaPredicted RBP17.86■□□□□ 0.45
HDAC6-225ENST00000483506 GLT6D1Q7Z4J2 308 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 NRROSQ86YC3 692 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 CACTIN-AS1Q8N1I8 211 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 RASGEF1CQ8N431 466 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 BLOC1S5Q8TDH9 187 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 LRRC45Q96CN5 670 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 VPS35Q96QK1 796 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 GSDMCQ9BYG8 508 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 LRRC40Q9H9A6 602 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 RMI1Q9H9A7 625 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms