RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 EPOP01588 193 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 CLCN4P51793 760 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 TBL3Q12788 808 aaKnown RBP14.42□□□□□ -0.1
CHD3-211ENST00000481999 ASPHQ12797 758 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 LIPMQ5VYY2 423 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 TMEM25Q86YD3 366 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 MRPL43Q8N983 215 aaKnown RBP14.42□□□□□ -0.1
CHD3-211ENST00000481999 CCDC124Q96CT7 223 aaKnown RBP14.42□□□□□ -0.1
CHD3-211ENST00000481999 ZSWIM3Q96MP5 696 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 DRC3Q9H069 523 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 ALG9Q9H6U8 611 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 ASAH2Q9NR71 780 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 ABCB8Q9NUT2 735 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 DNMT3BQ9UBC3 853 aaKnown RBP14.42□□□□□ -0.1
CHD3-211ENST00000481999 ZDHHC2Q9UIJ5 367 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 TSR3Q9UJK0 312 aaKnown RBP14.42□□□□□ -0.1
CHD3-211ENST00000481999 G3BP2Q9UN86 482 aaKnown RBP14.42□□□□□ -0.1
CHD3-211ENST00000481999 POMPQ9Y244 141 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 MATN2O00339 956 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 HDAC3O15379 428 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 HLA-FP30511 346 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 CCNHP51946 323 aaPredicted RBP14.41□□□□□ -0.1
CHD3-211ENST00000481999 POU4F1Q01851 419 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 ACVR1Q04771 509 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 MTA1Q13330 715 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 ASTLQ6HA08 431 aaPredicted RBP14.41□□□□□ -0.1
CHD3-211ENST00000481999 NCEH1Q6PIU2 408 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 LSMEM2Q8N112 164 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 CALML6Q8TD86 181 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 PPP2R3CQ969Q6 453 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 PTERQ96BW5 349 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 OR52B2Q96RD2 323 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 POMKQ9H5K3 350 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 SLC24A3Q9HC58 644 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 CATSPERZQ9NTU4 200 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 PDP2Q9P2J9 529 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 PRKAG2Q9UGJ0 569 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 SSX2IPQ9Y2D8 614 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 MED16Q9Y2X0 877 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 ASB3Q9Y575 518 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 MYO15AQ9UKN7 3530 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 H3BMM5 538 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 MOSPD3O75425 235 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 ZNF821O75541 412 aaPredicted RBP14.41□□□□□ -0.1
CHD3-211ENST00000481999 THRAP10827 490 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 COL6A2P12110 1019 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 FMO4P31512 558 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 RPL14P50914 215 aaKnown RBP14.41□□□□□ -0.1
CHD3-211ENST00000481999 MTTPP55157 894 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 IRX1P78414 480 aaPredicted RBP14.41□□□□□ -0.1
CHD3-211ENST00000481999 XIAPP98170 497 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 PPM1LQ5SGD2 360 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 SEL1L3Q68CR1 1132 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 FAM43BQ6ZT52 329 aaPredicted RBP14.41□□□□□ -0.1
CHD3-211ENST00000481999 KIAA0408Q6ZU52 694 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 ZSWIM9Q86XI8 627 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 SPPL3Q8TCT6 385 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 STON2Q8WXE9 905 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 CNDP1Q96KN2 507 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 SLC30A3Q99726 388 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 ZDHHC7Q9NXF8 308 aa14.41□□□□□ -0.1
CHD3-211ENST00000481999 TRAV19A0A0A6YYK7 116 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 TYW5A2RUC4 315 aaKnown RBP14.4□□□□□ -0.1
CHD3-211ENST00000481999 LRRC14BA6NHZ5 514 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 IQCF5A8MTL0 148 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 SLC22A2O15244 555 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 EPHA3P29320 983 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 PMLP29590 882 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 BMPR1AP36894 532 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 PEX19P40855 299 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 POLD2P49005 469 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 PRKAA1Q13131 559 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 DGKKQ5KSL6 1271 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 LYSMD3Q7Z3D4 306 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 HPS6Q86YV9 775 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 NUF2Q9BZD4 464 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 LSM7Q9UK45 103 aaKnown RBP14.4□□□□□ -0.1
CHD3-211ENST00000481999 IKZF3Q9UKT9 509 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 VCANP13611 3396 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 LINC01553A4QN01 128 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 SLCO1B7G3V0H7 640 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 TFEBP19484 476 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 WEE1P30291 646 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 CLCN5P51795 746 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 STC1P52823 247 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 SLC7A9P82251 487 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 TECRLQ5HYJ1 363 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 HTR3DQ70Z44 454 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 NAT16Q8N8M0 369 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 USP13Q92995 863 aaPredicted RBP14.4□□□□□ -0.1
CHD3-211ENST00000481999 MARK4Q96L34 752 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 UBXN10Q96LJ8 280 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 LENG8Q96PV6 779 aaPredicted RBP14.4□□□□□ -0.1
CHD3-211ENST00000481999 RAD9AQ99638 391 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 DDX50Q9BQ39 737 aaKnown RBP14.4□□□□□ -0.1
CHD3-211ENST00000481999 HTATIP2Q9BUP3 242 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 MRPL46Q9H2W6 279 aaKnown RBP14.4□□□□□ -0.1
CHD3-211ENST00000481999 NLE1Q9NVX2 485 aaPredicted RBP14.4□□□□□ -0.1
CHD3-211ENST00000481999 VTI1BQ9UEU0 232 aa14.4□□□□□ -0.1
CHD3-211ENST00000481999 NEDD8-MDP1E9PL57 170 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms