RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 TRBV23OR9-2A0A075B6M9 112 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 IGHV5-10-1A0A0J9YXX1 117 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 C1orf232A0A0U1RR37 186 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 GOLGA6L19H0YKK7 550 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 J3QKU1 62 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 KCNK1O00180 336 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 HGSO14964 777 aaPredicted RBP6.64□□□□□ -1.35
FN1-220ENST00000480024 MATN3O15232 486 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 PPM1DO15297 605 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 ZW10O43264 779 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 EFSO43281 561 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 PROSCO94903 275 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 CLDN7O95471 211 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 ASMTLO95671 621 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 SLC4A1P02730 911 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 ATP1A1P05023 1023 aaKnown RBP6.64□□□□□ -1.35
FN1-220ENST00000480024 ZNF30P17039 623 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 CA4P22748 312 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 CD1CP29017 333 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 CASP14P31944 242 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 STC1P52823 247 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 TAS2R40P59535 323 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 PTSQ03393 145 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 NIPAL4Q0D2K0 466 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 ZBTB17Q13105 803 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 IHHQ14623 411 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 NR1D2Q14995 579 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 PAFAH1B3Q15102 231 aaKnown RBP6.64□□□□□ -1.35
FN1-220ENST00000480024 IFI16Q16666 785 aaKnown RBP6.64□□□□□ -1.35
FN1-220ENST00000480024 PYCR3Q53H96 274 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 MANEAQ5SRI9 462 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 FAM182AQ5T1J6 154 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 ALG1LQ6GMV1 187 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 ZNF574Q6ZN55 896 aaPredicted RBP6.64□□□□□ -1.35
FN1-220ENST00000480024 ZNF765Q7L2R6 523 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 C17orf82Q86X59 251 aaPredicted RBP6.64□□□□□ -1.35
FN1-220ENST00000480024 LRRC49Q8IUZ0 686 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 CBARPQ8N350 705 aaPredicted RBP6.64□□□□□ -1.35
FN1-220ENST00000480024 PQLC3Q8N755 202 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 CCNYQ8ND76 341 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 FAM71BQ8TC56 605 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 CTNNBL1Q8WYA6 563 aaPredicted RBP6.64□□□□□ -1.35
FN1-220ENST00000480024 MAML1Q92585 1016 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 PMEPA1Q969W9 287 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 IQCDQ96DY2 449 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 SGF29Q96ES7 293 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 MED8Q96G25 268 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 ZNF830Q96NB3 372 aaPredicted RBP6.64□□□□□ -1.35
FN1-220ENST00000480024 PCDH9Q9HC56 1237 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 HAUS2Q9NVX0 235 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 KCNK4Q9NYG8 393 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 TMEM9Q9P0T7 183 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 SEPT10Q9P0V9 454 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 DNPEPQ9ULA0 475 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 NENFQ9UMX5 172 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 PPIL1Q9Y3C6 166 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 PCDHGA4Q9Y5G9 962 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 PCYT1BQ9Y5K3 369 aaPredicted RBP6.64□□□□□ -1.35
FN1-220ENST00000480024 IGHV1OR21-1A0A087WYE8 117 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 LRRD1A4D1F6 860 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 FADS2P1A8MWK0 482 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 STMND1H3BQB6 276 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 SLC28A2O43868 658 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 EML2O95834 649 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 PRLP01236 227 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 KRT7P08729 469 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 FAM87AP0C7U9 286 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 THRAP10827 490 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 ACP5P13686 325 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 WT1P19544 449 aaPredicted RBP6.63□□□□□ -1.35
FN1-220ENST00000480024 MX2P20592 715 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 CCNCP24863 283 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 CD86P42081 329 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 MAPK9P45984 424 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 GPR3P46089 330 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 LIMK2P53671 638 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 CYP4F2P78329 520 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 NFATC3Q12968 1075 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 PEX6Q13608 980 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 LRP8Q14114 963 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 GALNT3Q14435 633 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 MESDQ14696 234 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 PDK2Q15119 407 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 CLPPQ16740 277 aaPredicted RBP6.63□□□□□ -1.35
FN1-220ENST00000480024 TMEM164Q5U3C3 297 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 ALS2CLQ60I27 953 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 CHST15Q7LFX5 561 aaPredicted RBP6.63□□□□□ -1.35
FN1-220ENST00000480024 PRICKLE2Q7Z3G6 844 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 FAM129CQ86XR2 697 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 MAP7D3Q8IWC1 876 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 CCDC13Q8IYE1 715 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 SFRP1Q8N474 314 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 OR4D9Q8NGE8 314 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 EXD1Q8NHP7 514 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 ARRDC2Q8TBH0 407 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 SLC37A2Q8TED4 501 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 RAPGEF5Q92565 580 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 EXTL1Q92935 676 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 ART4Q93070 314 aa6.63□□□□□ -1.35
FN1-220ENST00000480024 FAF2Q96CS3 445 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms