RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 PLEKHG4BQ96PX9 1271 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 PSMB7Q99436 277 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 SLC39A3Q9BRY0 314 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 LMF2Q9BU23 707 aaKnown RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 TRABDQ9H4I3 376 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 SLC39A1Q9NY26 324 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 DENND4BO75064 1496 aaPredicted RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 MYH14Q7Z406 1995 aaKnown RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 A0A1B0GVM2 712 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 TCAF2A6NFQ2 919 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 BOLA2-SMG1P6H3BVE0 249 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 LRRN2O75325 713 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 UGT2B17O75795 530 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 LRIG2O94898 1065 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 RAC2P15153 192 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CD58P19256 250 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 SLC2A5P22732 501 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 PTPN7P35236 360 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 PPM1AP35813 382 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 USP4Q13107 963 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CLEC12BQ2HXU8 276 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 FAM69BQ5VUD6 431 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 AKAP14Q86UN6 197 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 PHYKPLQ8IUZ5 450 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 FAM217AQ8IXS0 508 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 OFCC1Q8IZS5 231 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 KCTD4Q8WVF5 259 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 OVCA2Q8WZ82 227 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 GLT1D1Q96MS3 346 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 RBCK1Q9BYM8 510 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 RRAGCQ9HB90 399 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 FAIMQ9NVQ4 179 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 TAS2R13Q9NYV9 303 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ADAM29Q9UKF5 820 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 KDM5CP41229 1560 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 POLR3AO14802 1390 aaPredicted RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 DCLK1O15075 740 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 PDPK1O15530 556 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 TFPIP10646 304 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 GTF2F2P13984 249 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CMPK1P30085 196 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 VIPR1P32241 457 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ARSEP51690 589 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 TSPAN5P62079 268 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CNPY1Q3B7I2 92 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 TMEM270Q6UE05 265 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 REPS2Q8NFH8 660 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 SUSD6Q92537 303 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 FNDC11Q9BVV2 318 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 KCNJ14Q9UNX9 436 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 AXIN2Q9Y2T1 843 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 PCDHGA8Q9Y5G5 932 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 HEMK1Q9Y5R4 338 aaPredicted RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 ABCA8O94911 1581 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 FUOMA2VDF0 154 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ANXA2P2A6NMY6 339 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 TRAFD1O14545 582 aaPredicted RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 FGBP02675 491 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 DNTTP04053 509 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ANXA2P07355 339 aaKnown RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 FGFR3P22607 806 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 RBL1P28749 1068 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 FMO5P49326 533 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 PGDP52209 483 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CHRNA6Q15825 494 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 KCNJ8Q15842 424 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 GPR33Q49SQ1 333 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 BOLA3Q53S33 107 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CHSY3Q70JA7 882 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ADGRD2Q7Z7M1 963 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 GLYCTKQ8IVS8 523 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 SLC43A2Q8N370 569 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 NOA1Q8NC60 698 aaKnown RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 OR52K1Q8NGK4 314 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 OR2L2Q8NH16 312 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 HAVCR2Q8TDQ0 301 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 FCRL2Q96LA5 508 aaPredicted RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 ZCCHC3Q9NUD5 404 aaKnown RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 PCDHA7Q9UN72 937 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ZNF726A6NNF4 738 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 B4E1Z4 1266 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 TSTD3H0UI37 97 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CASKO14936 926 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 SHOXO15266 292 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ITM2AO43736 263 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 MOCS2O96007 188 aaPredicted RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 ENO1P06733 434 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 SSTR3P32745 418 aaPredicted RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 IRAK1P51617 712 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 MAPK10P53779 464 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ABATP80404 500 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 TNK2Q07912 1038 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 TCP10Q12799 353 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 PTPRRQ15256 657 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 DPYSL2Q16555 572 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ASTE1Q2TB18 679 aaPredicted RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 ZFP69Q49AA0 526 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 TPRG1LQ5T0D9 272 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ZNF697Q5TEC3 545 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ZNF280DQ6N043 979 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms