RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 DGKAP23743 735 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 TRIM23P36406 574 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 FDFT1P37268 417 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 COILP38432 576 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-222ENST00000478095 GRK6P43250 576 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 LMAN1P49257 510 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 SRP54P61011 504 aaKnown RBP10.22□□□□□ -0.77
HDAC6-222ENST00000478095 BASP1P80723 227 aaKnown RBP10.22□□□□□ -0.77
HDAC6-222ENST00000478095 PPARDQ03181 441 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 DPTQ07507 201 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 PTPRCAPQ14761 206 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 SUZ12Q15022 739 aaKnown RBP10.22□□□□□ -0.77
HDAC6-222ENST00000478095 PRRT3Q5FWE3 981 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 HENMT1Q5T8I9 393 aaKnown RBP10.22□□□□□ -0.77
HDAC6-222ENST00000478095 PSAPL1Q6NUJ1 521 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 ZNF765Q7L2R6 523 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 DGLUCYQ7Z3D6 616 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 PIP4P1Q86T03 277 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 EID2Q8N6I1 236 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 ZNF548Q8NEK5 533 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-222ENST00000478095 OR56A4Q8NGH8 313 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 OR52K1Q8NGK4 314 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 LMX1AQ8TE12 382 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 RHBDD1Q8TEB9 315 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 OR1E3Q8WZA6 343 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 LRRC45Q96CN5 670 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 WDR92Q96MX6 357 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 SPATA16Q9BXB7 569 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 TEX101Q9BY14 249 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 SLC32A1Q9H598 525 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 PHPT1Q9NRX4 125 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-222ENST00000478095 KCND1Q9NSA2 647 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 KCTD5Q9NXV2 234 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 HACD3Q9P035 362 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 APOBEC3BQ9UH17 382 aaKnown RBP10.22□□□□□ -0.77
HDAC6-222ENST00000478095 PCOLCE2Q9UKZ9 415 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 TMEM98Q9Y2Y6 226 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 KCTD3Q9Y597 815 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 CEP192Q8TEP8 1941 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 CEP250Q9BV73 2442 aa10.22□□□□□ -0.77
HDAC6-222ENST00000478095 CCDC78A2IDD5 438 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 GPR39O43194 453 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 PHF2O75151 1096 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 RASGRP1O95267 797 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 KCNK5O95279 499 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 APRTP07741 180 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 CSRP1P21291 193 aaKnown RBP10.21□□□□□ -0.77
HDAC6-222ENST00000478095 KELP23276 732 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 HMGCLP35914 325 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 GRIA1P42261 906 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 POLD2P49005 469 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 HK3P52790 923 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 DCDC1P59894 354 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 HNRNPKP61978 463 aaKnown RBP eCLIP10.21□□□□□ -0.77
HDAC6-222ENST00000478095 SEMA5AQ13591 1074 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 SEPT6Q14141 434 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 POU6F1Q14863 301 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 CYP1B1Q16678 543 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 PPM1JQ5JR12 505 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 CCDC137Q6PK04 289 aaKnown RBP10.21□□□□□ -0.77
HDAC6-222ENST00000478095 FAM151BQ6UXP7 276 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 ADAMTSL4Q6UY14 1074 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 SYT10Q6XYQ8 523 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 PPP1R21Q6ZMI0 780 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 DBX2Q6ZNG2 339 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 MICALCLQ6ZW33 695 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 MARK2Q7KZI7 788 aaKnown RBP10.21□□□□□ -0.77
HDAC6-222ENST00000478095 KANSL1Q7Z3B3 1105 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 CREG2Q8IUH2 290 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 SLC25A45Q8N413 288 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 ATL2Q8NHH9 583 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 SRPK1Q96SB4 655 aaKnown RBP10.21□□□□□ -0.77
HDAC6-222ENST00000478095 LRRC61Q9BV99 259 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 SLC13A1Q9BZW2 595 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 TRABDQ9H4I3 376 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 CARS2Q9HA77 564 aaKnown RBP10.21□□□□□ -0.77
HDAC6-222ENST00000478095 CYP4F12Q9HCS2 524 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 ARFGAP3Q9NP61 516 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.21□□□□□ -0.77
HDAC6-222ENST00000478095 IL17CQ9P0M4 197 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 SAR1BQ9Y6B6 198 aa10.21□□□□□ -0.77
HDAC6-222ENST00000478095 DNAH14Q0VDD8 3507 aa10.21□□□□□ -0.78
HDAC6-222ENST00000478095 PRSS38A1L453 326 aa10.2□□□□□ -0.78
HDAC6-222ENST00000478095 RGSL1A5PLK6 1076 aa10.2□□□□□ -0.78
HDAC6-222ENST00000478095 C2orf81A6NN90 581 aa10.2□□□□□ -0.78
HDAC6-222ENST00000478095 PDE2AO00408 941 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-222ENST00000478095 CCL22O00626 93 aa10.2□□□□□ -0.78
HDAC6-222ENST00000478095 TRIM38O00635 465 aa10.2□□□□□ -0.78
HDAC6-222ENST00000478095 STX7O15400 261 aaKnown RBP10.2□□□□□ -0.78
HDAC6-222ENST00000478095 PSMD3O43242 534 aa10.2□□□□□ -0.78
HDAC6-222ENST00000478095 AQP9O43315 295 aa10.2□□□□□ -0.78
HDAC6-222ENST00000478095 CBFA2T3O75081 653 aa10.2□□□□□ -0.78
HDAC6-222ENST00000478095 MTX2O75431 263 aa10.2□□□□□ -0.78
HDAC6-222ENST00000478095 ASMTLO95671 621 aa10.2□□□□□ -0.78
HDAC6-222ENST00000478095 KRT14P02533 472 aa10.2□□□□□ -0.78
HDAC6-222ENST00000478095 FUCA1P04066 466 aa10.2□□□□□ -0.78
HDAC6-222ENST00000478095 CEACAM5P06731 702 aa10.2□□□□□ -0.78
HDAC6-222ENST00000478095 HOXC4P09017 264 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-222ENST00000478095 MYF5P13349 255 aa10.2□□□□□ -0.78
HDAC6-222ENST00000478095 TEAD1P28347 426 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms