RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 PIRTP0C851 137 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 CTSEP14091 401 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 PDX1P52945 283 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 CDK3Q00526 305 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 WASHC5Q12768 1159 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 NR0B2Q15466 257 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 ZDHHC20Q5W0Z9 365 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 PDPK2PQ6A1A2 396 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 RAET1GQ6H3X3 334 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 DOK6Q6PKX4 331 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 PID1Q7Z2X4 250 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 ZC3H18Q86VM9 953 aaKnown RBP13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 LRRC8AQ8IWT6 810 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 WDR48Q8TAF3 677 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 DTX3LQ8TDB6 740 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 NAT6Q93015 286 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 CCDC74AQ96AQ1 378 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 LRRC45Q96CN5 670 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 AP2M1Q96CW1 435 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 NXPE2Q96DL1 559 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 DCBLD2Q96PD2 775 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 HERPUD2Q9BSE4 406 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 DESI2Q9BSY9 194 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 FRMD8P1Q9BZ68 369 aaPredicted RBP13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 ABCG8Q9H221 673 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 SYNDIG1Q9H7V2 258 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 HACD3Q9P035 362 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 KLHL8Q9P2G9 620 aaPredicted RBP13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 PADI4Q9UM07 663 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 GPR34Q9UPC5 381 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 TMEM98Q9Y2Y6 226 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 PCYT1BQ9Y5K3 369 aaPredicted RBP13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 AK5Q9Y6K8 562 aa13.75□□□□□ -0.21
SOX2-OT-208ENST00000477928 C1orf232A0A0U1RR37 186 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 LOC285095A0A1B0GVY8 99 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 PRSS38A1L453 326 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 B4DGG1 531 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 AGRPO00253 132 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 DDX3YO15523 660 aaKnown RBP13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 BRINP1O60477 761 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 ANXA9O76027 345 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 CEACAM5P06731 702 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 IVLP07476 585 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 HOXB3P14651 431 aaPredicted RBP13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 HLA-DPA1P20036 260 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 ITPKBP27987 946 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 GPR1P46091 355 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 SPINT3P49223 89 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 DCDC1P59894 354 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 OTUD4Q01804 1114 aaKnown RBP13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 GALNT3Q14435 633 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 COL28A1Q2UY09 1125 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 NRROSQ86YC3 692 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 SPATA22Q8NHS9 363 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 ACTL9Q8TC94 416 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 PATE1Q8WXA2 126 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 ALG3Q92685 438 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 GRAMD1AQ96CP6 724 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 EID2BQ96D98 161 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 SCARF2Q96GP6 870 aaPredicted RBP13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 ATXN7L3BQ96GX2 97 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 ALS2CR12Q96Q35 445 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 WDR24Q96S15 920 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 CCDC3Q9BQI4 270 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 HEMGNQ9BXL5 484 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 FRMD8Q9BZ67 464 aaPredicted RBP13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 C10orf88Q9H8K7 445 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 ZFYVE1Q9HBF4 777 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 TRNAU1APQ9NX07 287 aaKnown RBP13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 DKK4Q9UBT3 224 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 DOLKQ9UPQ8 538 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 SLC17A4Q9Y2C5 497 aa13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 AAR2Q9Y312 384 aaKnown RBP13.74□□□□□ -0.21
SOX2-OT-208ENST00000477928 GPR89AB7ZAQ6 455 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 H7C0C1 242 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 NOBOXO60393 691 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 USP12O75317 370 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 PTMAP06454 111 aaKnown RBP13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 GPR89BP0CG08 455 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 RBP3P10745 1247 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 PYGMP11217 842 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 AK4P27144 223 aaPredicted RBP13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 CD68P34810 354 aaPredicted RBP13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 ATP5OP48047 213 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 GEMP55040 296 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 RTP5Q14D33 572 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 HENMT1Q5T8I9 393 aaKnown RBP13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 MARK2Q7KZI7 788 aaKnown RBP13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 TMC3Q7Z5M5 1100 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 TAF8Q7Z7C8 310 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 B3GNT8Q7Z7M8 397 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 ZNF567Q8N184 647 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 ARL10Q8N8L6 244 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 FAM46DQ8NEK8 389 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 HIC2Q96JB3 615 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 C19orf43Q9BQ61 176 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 ZSCAN5AQ9BUG6 496 aa13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 RIOK2Q9BVS4 552 aaKnown RBP13.73□□□□□ -0.21
SOX2-OT-208ENST00000477928 ABCG4Q9H172 646 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms