RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 LPIN1Q14693 890 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 MARCH8Q5T0T0 291 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 OR2T34Q8NGX1 318 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 OR2T3Q8NH03 318 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 FBXO30Q8TB52 745 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 CORO1BQ9BR76 489 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 ARL5AQ9Y689 179 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 A8MT66 165 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 ALDH1A2O94788 518 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 COL6A1P12109 1028 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 SP100P23497 879 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-220ENST00000477528 IL4RP24394 825 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 GJA5P36382 358 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 CLK1P49759 484 aaKnown RBP14.58□□□□□ -0.08
HDAC6-220ENST00000477528 TNFAIP8L3Q5GJ75 292 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 TMEM198Q66K66 360 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 ZNF549Q6P9A3 640 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 B3GNT6Q6ZMB0 384 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 PROSER1Q86XN7 944 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 CLVS1Q8IUQ0 354 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-220ENST00000477528 ADHFE1Q8IWW8 467 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 REM2Q8IYK8 340 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-220ENST00000477528 PLD6Q8N2A8 252 aaKnown RBP14.58□□□□□ -0.08
HDAC6-220ENST00000477528 ENDOVQ8N8Q3 282 aaKnown RBP14.58□□□□□ -0.08
HDAC6-220ENST00000477528 GRIN3AQ8TCU5 1115 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 CD99L2Q8TCZ2 262 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 ATL1Q8WXF7 558 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 IRAK4Q9NWZ3 460 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 IMPAD1Q9NX62 359 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 ZNF831Q5JPB2 1677 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 FAM189A1O60320 539 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 KDM1AO60341 852 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 UROSP10746 265 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 AP1S1P61966 158 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 CNTN1Q12860 1018 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 CCDC142Q17RM4 750 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 VPS26BQ4G0F5 336 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 PRSS55Q6UWB4 352 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-220ENST00000477528 MAGEB10Q96LZ2 347 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-220ENST00000477528 COMMD3-BMI1R4GMX3 469 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 DPPA5A6NC42 116 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 F8W810 466 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 ESR1P03372 595 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 HNRNPCP07910 306 aaKnown RBP eCLIP14.57□□□□□ -0.08
HDAC6-220ENST00000477528 ASRGL1Q7L266 308 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 TRMT11Q7Z4G4 463 aaKnown RBP14.57□□□□□ -0.08
HDAC6-220ENST00000477528 C1orf74Q96LT6 269 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 ZDHHC2Q9UIJ5 367 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 FKBPLQ9UIM3 349 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 GLYATL1P3A0A0U1RQE8 302 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 OR51F1A6NGY5 319 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 ZSCAN9O15535 394 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-220ENST00000477528 HS6ST1O60243 411 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 SNAP91O60641 907 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 DHRS4L1P0CG22 281 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 PTGER3P43115 390 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 HERVK_113P63132 956 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 IL5RAQ01344 420 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 PFKPQ01813 784 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 CDC16Q13042 620 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 TSNQ15631 228 aaKnown RBP14.57□□□□□ -0.08
HDAC6-220ENST00000477528 MPPE1Q53F39 396 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 MS4A13Q5J8X5 152 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 UBXN11Q5T124 520 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 OR13C4Q8NGS5 318 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 SLC7A6OSQ96CW6 309 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-220ENST00000477528 MAGED4Q96JG8 741 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 ERVK-6Q9BXR3 956 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 MUC13Q9H3R2 512 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 TMEM248Q9NWD8 314 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 BHMG1C9JSJ3 638 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-220ENST00000477528 QSOX1O00391 747 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 KPNA3O00505 521 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-220ENST00000477528 PIP5K1BO14986 540 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 SLC25A14O95258 325 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-220ENST00000477528 ADH1AP07327 375 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 ALOX15P16050 662 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-220ENST00000477528 GCAP28676 217 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 ZBTB6Q15916 424 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 ZNF621Q6ZSS3 439 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 FRMD7Q6ZUT3 714 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 RASAL3Q86YV0 1011 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 TREML1Q86YW5 311 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 MICU2Q8IYU8 434 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 NUSAP1Q9BXS6 441 aaKnown RBP14.57□□□□□ -0.08
HDAC6-220ENST00000477528 SEZ6LQ9BYH1 1024 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 MAGEL2Q9UJ55 1249 aa14.57□□□□□ -0.08
HDAC6-220ENST00000477528 WNK3Q9BYP7 1800 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 TIPRLO75663 272 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 PAPSS2O95340 614 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-220ENST00000477528 MAGEA11P43364 429 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 POLR2JP52435 117 aaKnown RBP14.56□□□□□ -0.08
HDAC6-220ENST00000477528 PAOXQ6QHF9 649 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 DET1Q7L5Y6 550 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 PHTF2Q8N3S3 785 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 MAB21L3Q8N8X9 362 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 C2CD4AQ8NCU7 369 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-220ENST00000477528 NOL11Q9H8H0 719 aaKnown RBP14.56□□□□□ -0.08
HDAC6-220ENST00000477528 DDX18Q9NVP1 670 aaKnown RBP14.56□□□□□ -0.08
HDAC6-220ENST00000477528 CFAP97Q9P2B7 532 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms