RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 CCDC122Q5T0U0 273 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 NKAIN2Q5VXU1 208 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 ALKBH5Q6P6C2 394 aaKnown RBP11.3□□□□□ -0.6
HDLBP-236ENST00000477477 MARK2Q7KZI7 788 aaKnown RBP11.3□□□□□ -0.6
HDLBP-236ENST00000477477 GALNT13Q8IUC8 556 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 NRSN1Q8IZ57 195 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 OR4D9Q8NGE8 314 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 EXD1Q8NHP7 514 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 ARRDC2Q8TBH0 407 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 ZNF564Q8TBZ8 553 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-236ENST00000477477 EXTL1Q92935 676 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 FATE1Q969F0 183 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 COX14Q96I36 57 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 TSGA13Q96PP4 275 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 TAAR9Q96RI9 348 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 AGAP2Q99490 1192 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 DPYSL5Q9BPU6 564 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 ZNF670Q9BS34 389 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 RIOK2Q9BVS4 552 aaKnown RBP11.3□□□□□ -0.6
HDLBP-236ENST00000477477 HAUS2Q9NVX0 235 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 AMACRQ9UHK6 382 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 CHKBQ9Y259 395 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 TTLL3Q9Y4R7 772 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 PCDHGA3Q9Y5H0 932 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 ARHGEF17Q96PE2 2063 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-236ENST00000477477 INPP4BO15327 924 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 SLC28A2O43868 658 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 PRLP01236 227 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 FGF3P11487 239 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-236ENST00000477477 CA4P22748 312 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 CES1P23141 567 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 CCNCP24863 283 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 GJC1P36383 396 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 FASLGP48023 281 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 GPLD1P80108 840 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 NFATC3Q12968 1075 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 IFI16Q16666 785 aaKnown RBP11.29□□□□□ -0.6
HDLBP-236ENST00000477477 ATP13A4Q4VNC1 1196 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 CPNE8Q86YQ8 564 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 RAVER1Q8IY67 606 aaKnown RBP11.29□□□□□ -0.6
HDLBP-236ENST00000477477 SFRP1Q8N474 314 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.29□□□□□ -0.6
HDLBP-236ENST00000477477 ZSCAN1Q8NBB4 408 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 AGBL5Q8NDL9 886 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 LPCAT1Q8NF37 534 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 SLC37A2Q8TED4 501 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 HTR3CQ8WXA8 447 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 PMEPA1Q969W9 287 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 FAF2Q96CS3 445 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 IQCDQ96DY2 449 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 LYSMD1Q96S90 227 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 ARHGAP9Q9BRR9 750 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 CBX8Q9HC52 389 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 RBM22Q9NW64 420 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■■□□□ 11.4
HDLBP-236ENST00000477477 KCNK4Q9NYG8 393 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 TMEM9Q9P0T7 183 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 CAPN11Q9UMQ6 739 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 NENFQ9UMX5 172 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 BOD1L1Q8NFC6 3051 aa11.29□□□□□ -0.6
HDLBP-236ENST00000477477 PYCARD-AS1I3L0S3 204 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 DNAJC6O75061 913 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 CLDN7O95471 211 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 ASMTLO95671 621 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 EML2O95834 649 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 HLA-DQB2P05538 268 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 FAM87AP0C7U9 286 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 MPSTP25325 297 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 CSTF2P33240 577 aaKnown RBP eCLIP11.28□□□□□ -0.6
HDLBP-236ENST00000477477 ATP1A2P50993 1020 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 UBASH3AP57075 661 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 RPL26P61254 145 aaKnown RBP11.28□□□□□ -0.6
HDLBP-236ENST00000477477 TPM4P67936 248 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 GBE1Q04446 702 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 NIPAL4Q0D2K0 466 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 PDK2Q15119 407 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 NFKBIBQ15653 356 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 ANKRD20A8PQ5CZ79 823 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-236ENST00000477477 TMEM71Q6P5X7 295 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 PRICKLE2Q7Z3G6 844 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 LUZP1Q86V48 1076 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 ZNF761Q86XN6 746 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-236ENST00000477477 MAP7D3Q8IWC1 876 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 KCTD6Q8NC69 237 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 CCDC112Q8NEF3 446 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 LRRN4Q8WUT4 740 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 JPH3Q8WXH2 748 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-236ENST00000477477 ART4Q93070 314 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 NKD1Q969G9 470 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 HDAC11Q96DB2 347 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 WDR24Q96S15 920 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 DDA1Q9BW61 102 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 PCDH9Q9HC56 1237 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 STARD5Q9NSY2 213 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 VPS18Q9P253 973 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 PDP2Q9P2J9 529 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 CNOT6Q9ULM6 557 aaKnown RBP11.28□□□□□ -0.6
HDLBP-236ENST00000477477 RPL26L1Q9UNX3 145 aaKnown RBP11.28□□□□□ -0.6
HDLBP-236ENST00000477477 PCYT1BQ9Y5K3 369 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-236ENST00000477477 HEMK1Q9Y5R4 338 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms