RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 RAPH1Q70E73 1250 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 IL17RCQ8NAC3 791 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 CABS1Q96KC9 395 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 OLFM1Q99784 485 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 GABRG3Q99928 467 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 RSPH9Q9H1X1 276 aaPredicted RBP28.71■■■□□ 2.19
VEGFA-211ENST00000476772 SLC2A4RGQ9NR83 387 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 FAM50BQ9Y247 325 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 UBA6A0AVT1 1052 aaPredicted RBP28.7■■■□□ 2.19
VEGFA-211ENST00000476772 SHISA7A6NL88 538 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 LOC730098B7Z3J9 87 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 ASMTLO95671 621 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 STMN1P16949 149 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 ITGALP20701 1170 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 CA5AP35218 305 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 PTPN5P54829 565 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 RAB10P61026 200 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 NFATC2Q13469 925 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 ZNF460Q14592 562 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 ZKSCAN8Q15776 578 aaPredicted RBP28.7■■■□□ 2.19
VEGFA-211ENST00000476772 SEPT7Q16181 437 aaKnown RBP28.7■■■□□ 2.19
VEGFA-211ENST00000476772 PUS10Q3MIT2 529 aaKnown RBP28.7■■■□□ 2.19
VEGFA-211ENST00000476772 FAM46CQ5VWP2 391 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 ERN2Q76MJ5 926 aaKnown RBP28.7■■■□□ 2.19
VEGFA-211ENST00000476772 SNX20Q7Z614 316 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 CACUL1Q86Y37 369 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 KCNV2Q8TDN2 545 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 DYDC1Q8WWB3 177 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 TBRG4Q969Z0 631 aaKnown RBP eCLIP28.7■■■□□ 2.19
VEGFA-211ENST00000476772 FAM111AQ96PZ2 611 aa28.7■■■□□ 2.19
VEGFA-211ENST00000476772 PAIP2Q9BPZ3 127 aaKnown RBP28.7■■■□□ 2.19
VEGFA-211ENST00000476772 CORO1CQ9ULV4 474 aaPredicted RBP28.7■■■□□ 2.19
VEGFA-211ENST00000476772 A6NNZ2 444 aa28.7■■■□□ 2.18
VEGFA-211ENST00000476772 GLRA3O75311 464 aa28.7■■■□□ 2.18
VEGFA-211ENST00000476772 KLF8O95600 359 aaPredicted RBP28.7■■■□□ 2.18
VEGFA-211ENST00000476772 LSP1P33241 339 aa28.7■■■□□ 2.18
VEGFA-211ENST00000476772 IRF9Q00978 393 aa28.7■■■□□ 2.18
VEGFA-211ENST00000476772 SATB1Q01826 763 aa28.7■■■□□ 2.18
VEGFA-211ENST00000476772 TUBB8Q3ZCM7 444 aa28.7■■■□□ 2.18
VEGFA-211ENST00000476772 RNF187Q5TA31 235 aaPredicted RBP28.7■■■□□ 2.18
VEGFA-211ENST00000476772 SDE2Q6IQ49 451 aa28.7■■■□□ 2.18
VEGFA-211ENST00000476772 KIAA1211LQ6NV74 962 aa28.7■■■□□ 2.18
VEGFA-211ENST00000476772 TAX1BP1Q86VP1 789 aa28.7■■■□□ 2.18
VEGFA-211ENST00000476772 PLEKHG4BQ96PX9 1271 aa28.7■■■□□ 2.18
VEGFA-211ENST00000476772 PRDM6Q9NQX0 595 aa28.7■■■□□ 2.18
VEGFA-211ENST00000476772 CD84Q9UIB8 345 aa28.7■■■□□ 2.18
VEGFA-211ENST00000476772 PLLPQ9Y342 182 aa28.7■■■□□ 2.18
VEGFA-211ENST00000476772 ADAM23O75077 832 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 SLC35E2BP0CK96 405 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 UGT1A6P19224 532 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 UGT1A1P22309 533 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 UGT1A4P22310 534 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 UGT1A3P35503 534 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 UGT1A5P35504 534 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 SLC12A2P55011 1212 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 ILF2Q12905 390 aaKnown RBP28.69■■■□□ 2.18
VEGFA-211ENST00000476772 SLC44A4Q53GD3 710 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 ZDHHC20Q5W0Z9 365 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 FAM45BPQ6NSW5 357 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 LIPIQ6XZB0 460 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 FAM45AQ8TCE6 357 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 MSANTD3Q96H12 275 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 VPS9D1Q9Y2B5 631 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 VWA7Q9Y334 891 aa28.69■■■□□ 2.18
VEGFA-211ENST00000476772 AREL1O15033 823 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 PFDN6O15212 129 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 OR1I1O60431 355 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 RNASEH1O60930 286 aaKnown RBP28.68■■■□□ 2.18
VEGFA-211ENST00000476772 ELFN1P0C7U0 828 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 ETV4P43268 484 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 CDKN2DP55273 166 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 ELP6Q0PNE2 266 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 CNTN1Q12860 1018 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 CST6Q15828 149 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 TAF1BQ53T94 588 aaPredicted RBP28.68■■■□□ 2.18
VEGFA-211ENST00000476772 HHATQ5VTY9 493 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 SERPINA9Q86WD7 417 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 PLD6Q8N2A8 252 aaKnown RBP28.68■■■□□ 2.18
VEGFA-211ENST00000476772 TXNDC5Q8NBS9 432 aaKnown RBP28.68■■■□□ 2.18
VEGFA-211ENST00000476772 ZNF398Q8TD17 642 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 FAM3CQ92520 227 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 AARSD1Q9BTE6 412 aaKnown RBP28.68■■■□□ 2.18
VEGFA-211ENST00000476772 WRAP53Q9BUR4 548 aaKnown RBP28.68■■■□□ 2.18
VEGFA-211ENST00000476772 HDAC8Q9BY41 377 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 PSD3Q9NYI0 1048 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 DCDC2Q9UHG0 476 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 TLK1Q9UKI8 766 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 GRID1Q9ULK0 1009 aa28.68■■■□□ 2.18
VEGFA-211ENST00000476772 TRBV5-4A0A0C4DH59 114 aa28.67■■■□□ 2.18
VEGFA-211ENST00000476772 MID1O15344 667 aa28.67■■■□□ 2.18
VEGFA-211ENST00000476772 CRABP2P29373 138 aa28.67■■■□□ 2.18
VEGFA-211ENST00000476772 FMO4P31512 558 aa28.67■■■□□ 2.18
VEGFA-211ENST00000476772 ETV3P41162 512 aa28.67■■■□□ 2.18
VEGFA-211ENST00000476772 P2RY2P41231 377 aa28.67■■■□□ 2.18
VEGFA-211ENST00000476772 SUOXP51687 545 aa28.67■■■□□ 2.18
VEGFA-211ENST00000476772 DBN1Q16643 649 aa28.67■■■□□ 2.18
VEGFA-211ENST00000476772 CERS6Q6ZMG9 384 aa28.67■■■□□ 2.18
VEGFA-211ENST00000476772 Q6ZVL8 140 aa28.67■■■□□ 2.18
VEGFA-211ENST00000476772 CLEC14AQ86T13 490 aa28.67■■■□□ 2.18
VEGFA-211ENST00000476772 CRLS1Q9UJA2 301 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms