RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 POLR3BQ9NW08 1133 aaPredicted RBP9.65□□□□□ -0.86
ITGA6-210ENST00000475302 LMCD1Q9NZU5 365 aa9.65□□□□□ -0.86
ITGA6-210ENST00000475302 HECAQ9UBI9 543 aaPredicted RBP9.65□□□□□ -0.86
ITGA6-210ENST00000475302 SLC39A10Q9ULF5 831 aa9.65□□□□□ -0.86
ITGA6-210ENST00000475302 STARD13Q9Y3M8 1113 aa9.65□□□□□ -0.86
ITGA6-210ENST00000475302 DENND4AQ7Z401 1863 aa9.65□□□□□ -0.86
ITGA6-210ENST00000475302 KIAA1549LQ6ZVL6 1849 aa9.65□□□□□ -0.86
ITGA6-210ENST00000475302 SCN8AQ9UQD0 1980 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 ZNF106Q9H2Y7 1883 aaKnown RBP9.64□□□□□ -0.87
ITGA6-210ENST00000475302 TRBV5-4A0A0C4DH59 114 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 WDR91A4D1P6 747 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 ERICH4A6NGS2 130 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 CAPN8A6NHC0 703 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 C2orf81A6NN90 581 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 TTC34A8MYJ7 566 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.64□□□□□ -0.87
ITGA6-210ENST00000475302 PRRT4C9JH25 899 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 PHGDHO43175 533 aaKnown RBP9.64□□□□□ -0.87
ITGA6-210ENST00000475302 TBX10O75333 385 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 ASLP04424 464 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 VIMP08670 466 aaKnown RBP9.64□□□□□ -0.87
ITGA6-210ENST00000475302 ALPIP09923 528 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 FGF3P11487 239 aaPredicted RBP9.64□□□□□ -0.87
ITGA6-210ENST00000475302 LAMP2P13473 410 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 CTPS1P17812 591 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 BGNP21810 368 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 CD9P21926 228 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 FDXRP22570 491 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 CRABP2P29373 138 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 ALDH3A1P30838 453 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 ARRB2P32121 409 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 SLC26A3P40879 764 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 OPRD1P41143 372 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 DGKGP49619 791 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 CDKN1CP49918 316 aaPredicted RBP9.64□□□□□ -0.87
ITGA6-210ENST00000475302 CDKN2DP55273 166 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 HNRNPH2P55795 449 aaKnown RBP9.64□□□□□ -0.87
ITGA6-210ENST00000475302 TMPRSS15P98073 1019 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 OCRLQ01968 901 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 BCL2L1Q07817 233 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 USP10Q14694 798 aaKnown RBP9.64□□□□□ -0.87
ITGA6-210ENST00000475302 PDGFRLQ15198 375 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 HSF5Q4G112 596 aaPredicted RBP9.64□□□□□ -0.87
ITGA6-210ENST00000475302 HECTD2Q5U5R9 776 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 GKAP1Q5VSY0 366 aaPredicted RBP9.64□□□□□ -0.87
ITGA6-210ENST00000475302 GET4Q7L5D6 327 aaPredicted RBP9.64□□□□□ -0.87
ITGA6-210ENST00000475302 GLT6D1Q7Z4J2 308 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 CPLX4Q7Z7G2 160 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 PIANPQ8IYJ0 282 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 ANKS4BQ8N8V4 417 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 KDM1BQ8NB78 822 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 OR6P1Q8NGX9 317 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 HCAR2Q8TDS4 363 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 SORCS1Q8WY21 1168 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 NXPE3Q969Y0 559 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 GRAMD1AQ96CP6 724 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 SCRN2Q96FV2 425 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 ATXN7L3BQ96GX2 97 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 BIRC8Q96P09 236 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 PAIP2Q9BPZ3 127 aaKnown RBP9.64□□□□□ -0.87
ITGA6-210ENST00000475302 ELAC2Q9BQ52 826 aaKnown RBP9.64□□□□□ -0.87
ITGA6-210ENST00000475302 MECRQ9BV79 373 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 C20orf27Q9GZN8 174 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 EBF3Q9H4W6 596 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 ATP13A3Q9H7F0 1226 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 SLC25A13Q9UJS0 675 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 CORO1CQ9ULV4 474 aaPredicted RBP9.64□□□□□ -0.87
ITGA6-210ENST00000475302 PHTF1Q9UMS5 762 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 ACOT9Q9Y305 439 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 VWA7Q9Y334 891 aa9.64□□□□□ -0.87
ITGA6-210ENST00000475302 DOCK8Q8NF50 2099 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 NPIPB15A6NHN6 443 aaPredicted RBP9.63□□□□□ -0.87
ITGA6-210ENST00000475302 KLHL2O95198 593 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 TGDSO95455 350 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 NFATC1O95644 943 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 CTSLP07711 333 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 DLDP09622 509 aaKnown RBP9.63□□□□□ -0.87
ITGA6-210ENST00000475302 POLR2EP19388 210 aaKnown RBP9.63□□□□□ -0.87
ITGA6-210ENST00000475302 LHCGRP22888 699 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 SERPINA4P29622 427 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 ADARP55265 1226 aaKnown RBP9.63□□□□□ -0.87
ITGA6-210ENST00000475302 PRAMEP78395 509 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 BST1Q10588 318 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 ZNF460Q14592 562 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 CCDC153Q494R4 210 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 FASTKD1Q53R41 847 aaKnown RBP9.63□□□□□ -0.87
ITGA6-210ENST00000475302 ATAT1Q5SQI0 421 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 MRNIPQ6NTE8 343 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 PSAPL1Q6NUJ1 521 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 AFTPHQ6ULP2 937 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 CRTC1Q6UUV9 634 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 LRRC8CQ8TDW0 803 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 CYB5D2Q8WUJ1 264 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 ANKRD49Q8WVL7 239 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 PPP2R3CQ969Q6 453 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 E2F7Q96AV8 911 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 ELSPBP1Q96BH3 223 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 C7orf26Q96N11 449 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 NDNQ99608 321 aa9.63□□□□□ -0.87
ITGA6-210ENST00000475302 AARSD1Q9BTE6 412 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms