RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 RCBTB1Q8NDN9 531 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 ACTL9Q8TC94 416 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SLC25A36Q96CQ1 311 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 CALML4Q96GE6 196 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 INTS4Q96HW7 963 aaKnown RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 FEM1CQ96JP0 617 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 HSD17B14Q9BPX1 270 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 DDX47Q9H0S4 455 aaKnown RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 C11orf16Q9NQ32 467 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 TRPC4Q9UBN4 977 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 TJP2Q9UDY2 1190 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 FZD10Q9ULW2 581 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SLC12A4Q9UP95 1085 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 PCDHAC2Q9Y5I4 1007 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 POM121BA6NF01 834 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 C12orf71A8MTZ7 269 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 A8MV72 311 aaPredicted RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 TMEM238C9JI98 176 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 TMX2-CTNND1H3BSU7 103 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 PLK4O00444 970 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SLC31A2O15432 143 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SAP30O75446 220 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 ADAMTS2O95450 1211 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 CLEC3BP05452 202 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 APOBEC3AP31941 199 aaPredicted RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 STX2P32856 288 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 FOXO4P98177 505 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 TGM3Q08188 693 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 ZC2HC1CQ53FD0 456 aaPredicted RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 MEDAGQ5VYS4 303 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 METTL7BQ6UX53 244 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 GPRIN3Q6ZVF9 776 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 DPPA2Q7Z7J5 298 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SETD3Q86TU7 594 aaPredicted RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 CACNG8Q8WXS5 425 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SYTL4Q96C24 671 aaPredicted RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 OMA1Q96E52 524 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 TMEM80Q96HE8 168 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 INTS14Q96SY0 518 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SEMA3CQ99985 751 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SOX7Q9BT81 388 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 NOC4LQ9BVI4 516 aaKnown RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 PAPOLGQ9BWT3 736 aaKnown RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 PRRG3Q9BZD7 231 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 ALX4Q9H161 411 aaPredicted RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 KAT14Q9H8E8 782 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 MKNK2Q9HBH9 465 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 ERVK-5Q9HDB9 667 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 NGBQ9NPG2 151 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 HIF1ANQ9NWT6 349 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 GRHL1Q9NZI5 618 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 APOBEC3BQ9UH17 382 aaKnown RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 DOLKQ9UPQ8 538 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 ZNF281Q9Y2X9 895 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 PCDHB11Q9Y5F2 797 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 BACE2Q9Y5Z0 518 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 CSNK1G3Q9Y6M4 447 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 WASF2Q9Y6W5 498 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SALL3Q9BXA9 1300 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 IRS2Q9Y4H2 1338 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SYCE3A1L190 88 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 TRIM49BA6NDI0 452 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 LRRC53A6NM62 1247 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 ZNF729A6NN14 1252 aaPredicted RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 PTGES3LE9PB15 166 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 STX16O14662 325 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 TRIM3O75382 744 aaPredicted RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 NDUFS3O75489 264 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 ECI2O75521 394 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SUN1O94901 812 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 NXPH2O95156 264 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 OAZ2O95190 189 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 NTRK1P04629 796 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SERPINA6P08185 405 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 C1SP09871 688 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 CLEC2LP0C7M8 214 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 AKR1A1P14550 325 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 IGFBP4P22692 258 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 CPT2P23786 658 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 GIFP27352 417 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 RBL1P28749 1068 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 CXCR5P32302 372 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 PTDSS1P48651 473 aaKnown RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 SLC11A2P49281 568 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 CEBPAP49715 358 aaPredicted RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 BMXP51813 675 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 NME5P56597 212 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 PPP2CBP62714 309 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 PPP2CAP67775 309 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 RAD51Q06609 339 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 FOXM1Q08050 763 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 POU6F1Q14863 301 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SSX2Q16385 188 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SEZ6Q53EL9 994 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 COX20Q5RI15 118 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 RIPPLY2Q5TAB7 128 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 IL20RBQ6UXL0 311 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 ZNF551Q7Z340 670 aaPredicted RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 PHACTR4Q8IZ21 702 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 PCDH20Q8N6Y1 951 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms