RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 INPP4AQ96PE3 977 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 MAP7D2Q96T17 732 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 ACOX2Q99424 681 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 MTERF1Q99551 399 aaKnown RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 EPYCQ99645 322 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 VPS33BQ9H267 617 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 FBRSL1Q9HCM7 1045 aaKnown RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 TCF7L2Q9NQB0 619 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 SMC4Q9NTJ3 1288 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 ACSS1Q9NUB1 689 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 POU2F3Q9UKI9 436 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 MAU2Q9Y6X3 613 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 CGNL1Q0VF96 1302 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 B4E171 279 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 SPINT2O43291 252 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 RNASEH2AO75792 299 aaKnown RBP3.88□□□□□ -1.79
BRCA2-202ENST00000470094 TMEM63AO94886 807 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 CCNDBP1O95273 360 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 IPO7O95373 1038 aaKnown RBP3.88□□□□□ -1.79
BRCA2-202ENST00000470094 CLEC3BP05452 202 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 LDHCP07864 332 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 HOXC9P31274 260 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 TSPAN7P41732 249 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 FASLGP48023 281 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 ZNF132P52740 706 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 EIF5P55010 431 aaKnown RBP3.88□□□□□ -1.79
BRCA2-202ENST00000470094 CSTF3Q12996 717 aaKnown RBP3.88□□□□□ -1.79
BRCA2-202ENST00000470094 SYT16Q17RD7 645 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 GPATCH4Q5T3I0 446 aaKnown RBP3.88□□□□□ -1.79
BRCA2-202ENST00000470094 TRNP1Q6NT89 227 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 Q6ZTC4 211 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 CPLX4Q7Z7G2 160 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 ZNF34Q8IZ26 560 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 RNF113BQ8IZP6 322 aaKnown RBP3.88□□□□□ -1.79
BRCA2-202ENST00000470094 TMEM116Q8NCL8 245 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 OR14L1PQ8NHC6 308 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 KCNG4Q8TDN1 519 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 ABTB1Q969K4 478 aaPredicted RBP3.88□□□□□ -1.79
BRCA2-202ENST00000470094 IGSF8Q969P0 613 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 MMABQ96EY8 250 aaPredicted RBP3.88□□□□□ -1.79
BRCA2-202ENST00000470094 C7orf26Q96N11 449 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 TTC14Q96N46 770 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 SCPEP1Q9HB40 452 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 LRRC4Q9HBW1 653 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 TXLNGQ9NUQ3 528 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 LIMA1Q9UHB6 759 aaKnown RBP3.88□□□□□ -1.79
BRCA2-202ENST00000470094 FBXO2Q9UK22 296 aaPredicted RBP3.88□□□□□ -1.79
BRCA2-202ENST00000470094 PADI1Q9ULC6 663 aa3.88□□□□□ -1.79
BRCA2-202ENST00000470094 PDS5AQ29RF7 1337 aaKnown RBP3.88□□□□□ -1.79
BRCA2-202ENST00000470094 BMPR1BO00238 502 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 TBX18O95935 607 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 IGKV3-20P01619 116 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 KCNA5P22460 613 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 PBX3P40426 434 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 RGS2P41220 211 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 RPS3AP61247 264 aaKnown RBP3.87□□□□□ -1.79
BRCA2-202ENST00000470094 GRIK2Q13002 908 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 GFRALQ6UXV0 394 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 GDPD4Q6W3E5 623 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 DSTYKQ6XUX3 929 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 TBC1D1Q86TI0 1168 aaPredicted RBP3.87□□□□□ -1.79
BRCA2-202ENST00000470094 TMEM219Q86XT9 240 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 KMT5CQ86Y97 462 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 C1orf87Q8N0U7 546 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 LMNTD1Q8N9Z9 388 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 BBS10Q8TAM1 723 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 SLC20A1Q8WUM9 679 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 ARHGEF26Q96DR7 871 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 GRAMD2BQ96HH9 432 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 PLEKHA5Q9HAU0 1116 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 TMEM30AQ9NV96 361 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 KCNE2Q9Y6J6 123 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 ITIH6Q6UXX5 1313 aa3.87□□□□□ -1.79
BRCA2-202ENST00000470094 LILRA5A6NI73 299 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 PRSS47A8MTI9 375 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 HS3ST1O14792 307 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 SLC25A12O75746 678 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 IGLV2-11P01706 119 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 CETPP11597 493 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 CDH1P12830 882 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 UBA1P22314 1058 aaKnown RBP3.86□□□□□ -1.79
BRCA2-202ENST00000470094 MT3P25713 68 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 CORO1AP31146 461 aaKnown RBP3.86□□□□□ -1.79
BRCA2-202ENST00000470094 FUT6P51993 359 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 TAS2R38P59533 333 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 CEBPZQ03701 1054 aaKnown RBP3.86□□□□□ -1.79
BRCA2-202ENST00000470094 HYAL1Q12794 435 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 MAD2L1Q13257 205 aaPredicted RBP3.86□□□□□ -1.79
BRCA2-202ENST00000470094 ACCSLQ4AC99 568 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 DCST1Q5T197 706 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 ZNF280DQ6N043 979 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 TTI2Q6NXR4 508 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 MZT2BQ6NZ67 158 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 BRAT1Q6PJG6 821 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 CYP20A1Q6UW02 462 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 FOXL2NBQ6ZUU3 175 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 ZNF771Q7L3S4 317 aaPredicted RBP3.86□□□□□ -1.79
BRCA2-202ENST00000470094 SLC9B2Q86UD5 537 aa3.86□□□□□ -1.79
BRCA2-202ENST00000470094 GPR180Q86V85 440 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms