RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ZNF513Q8N8E2 541 aaPredicted RBP18.58■□□□□ 0.56
CAPN3-209ENST00000466222 ARMC2Q8NEN0 867 aa18.58■□□□□ 0.56
CAPN3-209ENST00000466222 TBATAQ96M53 351 aa18.58■□□□□ 0.56
CAPN3-209ENST00000466222 TUBGCP5Q96RT8 1024 aa18.58■□□□□ 0.56
CAPN3-209ENST00000466222 RANBP9Q96S59 729 aa18.58■□□□□ 0.56
CAPN3-209ENST00000466222 IL36AQ9UHA7 158 aa18.58■□□□□ 0.56
CAPN3-209ENST00000466222 A0A0J9YYE9 177 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 PLK4O00444 970 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 SNNO75324 88 aaPredicted RBP18.57■□□□□ 0.56
CAPN3-209ENST00000466222 TRBC1P01850 177 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 BPGMP07738 259 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 ABCG1P45844 678 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 FSTL4Q6MZW2 842 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 LYSMD3Q7Z3D4 306 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 KCNMB4Q86W47 210 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 CACUL1Q86Y37 369 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 MAFAQ8NHW3 353 aaPredicted RBP18.57■□□□□ 0.56
CAPN3-209ENST00000466222 CDKL2Q92772 493 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 HDAC10Q969S8 669 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 FAM129BQ96TA1 746 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 STN1Q9H668 368 aaKnown RBP18.57■□□□□ 0.56
CAPN3-209ENST00000466222 TRPV5Q9NQA5 729 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 IARS2Q9NSE4 1012 aaKnown RBP18.57■□□□□ 0.56
CAPN3-209ENST00000466222 SORCS3Q9UPU3 1222 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 FNDC3AQ9Y2H6 1198 aaKnown RBP18.57■□□□□ 0.56
CAPN3-209ENST00000466222 STON1Q9Y6Q2 735 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 NPIPB15A6NHN6 443 aaPredicted RBP18.57■□□□□ 0.56
CAPN3-209ENST00000466222 MAGEC1O60732 1142 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 PRSS56P0CW18 603 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 GRIA4P48058 902 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 RAD51Q06609 339 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 ZRSR2Q15696 482 aaKnown RBP18.57■□□□□ 0.56
CAPN3-209ENST00000466222 CHI3L2Q15782 390 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 TEDDM1Q5T9Z0 273 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 RASSF3Q86WH2 238 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 DENND6AQ8IWF6 608 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 NDUFAF2Q8N183 169 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 OR4K2Q8NGD2 314 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 PTCD2Q8WV60 388 aaKnown RBP18.57■□□□□ 0.56
CAPN3-209ENST00000466222 UCMAQ8WVF2 138 aa18.57■□□□□ 0.56
CAPN3-209ENST00000466222 MRM3Q9HC36 420 aaKnown RBP18.57■□□□□ 0.56
CAPN3-209ENST00000466222 FBXO6Q9NRD1 293 aaPredicted RBP18.57■□□□□ 0.56
CAPN3-209ENST00000466222 POLR3BQ9NW08 1133 aaPredicted RBP18.57■□□□□ 0.56
CAPN3-209ENST00000466222 KIF26AQ9ULI4 1882 aaPredicted RBP18.56■□□□□ 0.56
CAPN3-209ENST00000466222 CLDN7O95471 211 aa18.56■□□□□ 0.56
CAPN3-209ENST00000466222 CHRM1P11229 460 aaPredicted RBP18.56■□□□□ 0.56
CAPN3-209ENST00000466222 ACADSP16219 412 aa18.56■□□□□ 0.56
CAPN3-209ENST00000466222 ATP6V1C1P21283 382 aa18.56■□□□□ 0.56
CAPN3-209ENST00000466222 PTAR1Q7Z6K3 402 aaPredicted RBP18.56■□□□□ 0.56
CAPN3-209ENST00000466222 TMPRSS6Q8IU80 811 aa18.56■□□□□ 0.56
CAPN3-209ENST00000466222 TTC30BQ8N4P2 665 aa18.56■□□□□ 0.56
CAPN3-209ENST00000466222 KCNV2Q8TDN2 545 aa18.56■□□□□ 0.56
CAPN3-209ENST00000466222 ZNF641Q96N77 438 aaPredicted RBP18.56■□□□□ 0.56
CAPN3-209ENST00000466222 FAM96AQ9H5X1 160 aa18.56■□□□□ 0.56
CAPN3-209ENST00000466222 PRSS16Q9NQE7 514 aa18.56■□□□□ 0.56
CAPN3-209ENST00000466222 PCMTD2Q9NV79 361 aa18.56■□□□□ 0.56
CAPN3-209ENST00000466222 THAP1Q9NVV9 213 aa18.56■□□□□ 0.56
CAPN3-209ENST00000466222 ZFATQ9P243 1243 aa18.56■□□□□ 0.56
CAPN3-209ENST00000466222 EDDM13A0A1B0GTR0 161 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 LOC730098B7Z3J9 87 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 KPNA3O00505 521 aaPredicted RBP18.55■□□□□ 0.56
CAPN3-209ENST00000466222 GLRA3O75311 464 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 RAP1GDS1P52306 607 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 ZNF140P52738 457 aaPredicted RBP18.55■□□□□ 0.56
CAPN3-209ENST00000466222 CTBP1Q13363 440 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 TDGQ13569 410 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 BLMHQ13867 455 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 BMPR2Q13873 1038 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 TAF1AQ15573 450 aaPredicted RBP18.55■□□□□ 0.56
CAPN3-209ENST00000466222 CDKN3Q16667 212 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 TMEM196Q5HYL7 178 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 LDB1Q86U70 411 aaPredicted RBP18.55■□□□□ 0.56
CAPN3-209ENST00000466222 RALGPS2Q86X27 583 aaPredicted RBP18.55■□□□□ 0.56
CAPN3-209ENST00000466222 MMAAQ8IVH4 418 aaKnown RBP18.55■□□□□ 0.56
CAPN3-209ENST00000466222 LMNTD2Q8IXW0 634 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 KDM1BQ8NB78 822 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 OR6P1Q8NGX9 317 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 ATXN7L3BQ96GX2 97 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 SLC13A1Q9BZW2 595 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 TAS2R1Q9NYW7 299 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 PPM1HQ9ULR3 514 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 ZNF711Q9Y462 761 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 C1orf232A0A0U1RR37 186 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 HMX2A2RU54 273 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 CAPN14A8MX76 684 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 GPR39O43194 453 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 ENTPD5O75356 428 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 LHCGRP22888 699 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 PTDSS1P48651 473 aaKnown RBP18.55■□□□□ 0.56
CAPN3-209ENST00000466222 STX3Q13277 289 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 UGP2Q16851 508 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 SLC44A4Q53GD3 710 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 KIAA1211LQ6NV74 962 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 CRTC1Q6UUV9 634 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 RINLQ6ZS11 566 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 NMUR2Q9GZQ4 415 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 MAGEE1Q9HCI5 957 aa18.55■□□□□ 0.56
CAPN3-209ENST00000466222 MARCH4Q9P2E8 410 aaPredicted RBP18.55■□□□□ 0.56
CAPN3-209ENST00000466222 CRTAMO95727 393 aa18.54■□□□□ 0.56
CAPN3-209ENST00000466222 HNRNPLP14866 589 aaKnown RBP eCLIP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms