RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 HSPB2Q16082 182 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 SIRPB2Q5JXA9 342 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 BSPRYQ5W0U4 402 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 ACAD10Q6JQN1 1059 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 FAAP20Q6NZ36 180 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 LRRC8DQ7L1W4 858 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 TAOK1Q7L7X3 1001 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 ADGRG6Q86SQ4 1221 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 P2RY8Q86VZ1 359 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 CPXM2Q8N436 756 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 PCYOX1LQ8NBM8 494 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 WDR20Q8TBZ3 569 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 KCNG4Q8TDN1 519 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 HDAC2Q92769 488 aaKnown RBP2.14□□□□□ -2.07
CCDC93-205ENST00000466171 SNAPC3Q92966 411 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 ABTB1Q969K4 478 aaPredicted RBP2.14□□□□□ -2.07
CCDC93-205ENST00000466171 ZBTB10Q96DT7 871 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 KIF1BPQ96EK5 621 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 RNF125Q96EQ8 232 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 SCRN2Q96FV2 425 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 ST6GAL2Q96JF0 529 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 LRR1Q96L50 414 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 LINC00479Q96M42 142 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 CD180Q99467 661 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 MPHOSPH8Q99549 860 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 SYT17Q9BSW7 474 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 POLR3CQ9BUI4 534 aaPredicted RBP2.14□□□□□ -2.07
CCDC93-205ENST00000466171 PHF7Q9BWX1 381 aaPredicted RBP2.14□□□□□ -2.07
CCDC93-205ENST00000466171 TRIM15Q9C019 465 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 TMX4Q9H1E5 349 aaPredicted RBP2.14□□□□□ -2.07
CCDC93-205ENST00000466171 SLC32A1Q9H598 525 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 JMJD4Q9H9V9 463 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 VEZTQ9HBM0 779 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 ZDHHC18Q9NUE0 388 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 BABAM1Q9NWV8 329 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 AASSQ9UDR5 926 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 TBX20Q9UMR3 447 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 CAMK2AQ9UQM7 478 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 CYP46A1Q9Y6A2 500 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 A0A0J9YWU9 116 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 C17orf113A0A1B0GUU1 675 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 TNPO2O14787 897 aaKnown RBP2.13□□□□□ -2.07
CCDC93-205ENST00000466171 TSPAN4O14817 238 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 ARHGEF9O43307 516 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 CEP104O60308 925 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 GUCY1B2O75343 617 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 ITGA2P17301 1181 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 NR1D1P20393 614 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 S1PR1P21453 382 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 ABCD3P28288 659 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 GTF2H2Q13888 395 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 SIM2Q14190 667 aaPredicted RBP2.13□□□□□ -2.07
CCDC93-205ENST00000466171 KRT32Q14532 448 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 MAPRE1Q15691 268 aaKnown RBP2.13□□□□□ -2.07
CCDC93-205ENST00000466171 CCDC30Q5VVM6 783 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 HAUS3Q68CZ6 603 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 GTF2H2CQ6P1K8 395 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 KCTD18Q6PI47 426 aaPredicted RBP2.13□□□□□ -2.07
CCDC93-205ENST00000466171 ATF7IPQ6VMQ6 1270 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 SLC36A4Q6YBV0 504 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 R3HCC1LQ7Z5L2 792 aaKnown RBP2.13□□□□□ -2.07
CCDC93-205ENST00000466171 CHERPQ8IWX8 916 aaKnown RBP2.13□□□□□ -2.07
CCDC93-205ENST00000466171 STPG4Q8N801 248 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 TSPYL6Q8N831 410 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 CNOT9Q92600 299 aaKnown RBP2.13□□□□□ -2.07
CCDC93-205ENST00000466171 SIN3AQ96ST3 1273 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 EYA3Q99504 573 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 MXRA8Q9BRK3 442 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 TRIM51Q9BSJ1 452 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.13□□□□□ -2.07
CCDC93-205ENST00000466171 AGXT2Q9BYV1 514 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 INTS2Q9H0H0 1204 aaKnown RBP2.13□□□□□ -2.07
CCDC93-205ENST00000466171 SLC25A18Q9H1K4 315 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 UNC45AQ9H3U1 944 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 PDZD7Q9H5P4 517 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 OLA1Q9NTK5 396 aaKnown RBP2.13□□□□□ -2.07
CCDC93-205ENST00000466171 ZNF624Q9P2J8 865 aaPredicted RBP2.13□□□□□ -2.07
CCDC93-205ENST00000466171 CARD8Q9Y2G2 431 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 C2CD2Q9Y426 696 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 ADGRF5Q8IZF2 1346 aa2.13□□□□□ -2.07
CCDC93-205ENST00000466171 IGLV5-45A0A087WSX0 123 aa2.12□□□□□ -2.07
CCDC93-205ENST00000466171 A0A1W2PPH5 198 aa2.12□□□□□ -2.07
CCDC93-205ENST00000466171 NDUFAF8A1L188 74 aa2.12□□□□□ -2.07
CCDC93-205ENST00000466171 MEIOCA2RUB1 952 aa2.12□□□□□ -2.07
CCDC93-205ENST00000466171 CBY3A6NI87 242 aa2.12□□□□□ -2.07
CCDC93-205ENST00000466171 FAM90A7PA6NKC0 464 aa2.12□□□□□ -2.07
CCDC93-205ENST00000466171 FAM90A22PA8MWA6 464 aa2.12□□□□□ -2.07
CCDC93-205ENST00000466171 FAM90A12PA8MX19 464 aa2.12□□□□□ -2.07
CCDC93-205ENST00000466171 FAM90A23PA8MXZ1 464 aa2.12□□□□□ -2.07
CCDC93-205ENST00000466171 HMGB1P1B2RPK0 211 aaPredicted RBP2.12□□□□□ -2.07
CCDC93-205ENST00000466171 B4E171 279 aa2.12□□□□□ -2.07
CCDC93-205ENST00000466171 NR5A2O00482 541 aa2.12□□□□□ -2.07
CCDC93-205ENST00000466171 SH2B2O14492 632 aaPredicted RBP2.12□□□□□ -2.07
CCDC93-205ENST00000466171 PER2O15055 1255 aa2.12□□□□□ -2.07
CCDC93-205ENST00000466171 RTN3O95197 1032 aaPredicted RBP2.12□□□□□ -2.07
CCDC93-205ENST00000466171 URODP06132 367 aa2.12□□□□□ -2.07
CCDC93-205ENST00000466171 ITGAXP20702 1163 aa2.12□□□□□ -2.07
CCDC93-205ENST00000466171 HOXA13P31271 388 aaPredicted RBP2.12□□□□□ -2.07
CCDC93-205ENST00000466171 TSPAN7P41732 249 aa2.12□□□□□ -2.07
CCDC93-205ENST00000466171 HARS2P49590 506 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms