RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 RAD18Q9NS91 495 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 IL17CQ9P0M4 197 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 KLQ9UEF7 1012 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 MOSPD1Q9UJG1 213 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 CNOT6Q9ULM6 557 aaKnown RBP12.32□□□□□ -0.44
CHPF2-202ENST00000465601 KCTD3Q9Y597 815 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 ARL5AQ9Y689 179 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 GOLGA6L10A0A0M3HER8 536 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 ERI2A8K979 691 aaKnown RBP12.31□□□□□ -0.44
CHPF2-202ENST00000465601 FADS2P1A8MWK0 482 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 H3BM21 787 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 PDE2AO00408 941 aaPredicted RBP12.31□□□□□ -0.44
CHPF2-202ENST00000465601 STX7O15400 261 aaKnown RBP12.31□□□□□ -0.44
CHPF2-202ENST00000465601 CBFA2T3O75081 653 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 PHF2O75151 1096 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 RASGRP1O95267 797 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 KCNK5O95279 499 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 TNFP01375 233 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 KRT14P02533 472 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 PYGLP06737 847 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 APRTP07741 180 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 KELP23276 732 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 CASQ1P31415 396 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 GRIA1P42261 906 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 GRK6P43250 576 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 POLD2P49005 469 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 VPS41P49754 854 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 HK3P52790 923 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 TERF1P54274 439 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 SEMA5AQ13591 1074 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 TCEA2Q15560 299 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 TAF1AQ15573 450 aaPredicted RBP12.31□□□□□ -0.44
CHPF2-202ENST00000465601 PRRT3Q5FWE3 981 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 PSAPL1Q6NUJ1 521 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 DOK6Q6PKX4 331 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 C4orf22Q6V702 233 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 SYT10Q6XYQ8 523 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 DGLUCYQ7Z3D6 616 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 ZNF548Q8NEK5 533 aaPredicted RBP12.31□□□□□ -0.44
CHPF2-202ENST00000465601 OR52K1Q8NGK4 314 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 BRSK1Q8TDC3 778 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 BTN2A2Q8WVV5 523 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 PDXPQ96GD0 296 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 HIC2Q96JB3 615 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 SLC13A1Q9BZW2 595 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 CDH19Q9H159 772 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 SUDS3Q9H7L9 328 aaPredicted RBP12.31□□□□□ -0.44
CHPF2-202ENST00000465601 CYP4F12Q9HCS2 524 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.31□□□□□ -0.44
CHPF2-202ENST00000465601 SPASTQ9UBP0 616 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 APOBEC3BQ9UH17 382 aaKnown RBP12.31□□□□□ -0.44
CHPF2-202ENST00000465601 FEZ2Q9UHY8 353 aaPredicted RBP12.31□□□□□ -0.44
CHPF2-202ENST00000465601 PCOLCE2Q9UKZ9 415 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 TMEM98Q9Y2Y6 226 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 PKP3Q9Y446 797 aa12.31□□□□□ -0.44
CHPF2-202ENST00000465601 UNC13CQ8NB66 2214 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 PIKFYVEQ9Y2I7 2098 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 SPAARA0A1B0GVQ0 90 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 C2orf81A6NN90 581 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 TNFRSF10CO14798 259 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 FFAR2O15552 330 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 AQP9O43315 295 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 SUN1O94901 812 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 ASMTLO95671 621 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 FUCA1P04066 466 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 CEACAM5P06731 702 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 CEACAM1P13688 526 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 CTSEP14091 401 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 LPOP22079 712 aaPredicted RBP12.3□□□□□ -0.44
CHPF2-202ENST00000465601 BLKP51451 505 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 DCDC1P59894 354 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 BASP1P80723 227 aaKnown RBP12.3□□□□□ -0.44
CHPF2-202ENST00000465601 TRIP6Q15654 476 aaKnown RBP12.3□□□□□ -0.44
CHPF2-202ENST00000465601 INAVAQ3KP66 663 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 PPM1JQ5JR12 505 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 PPP1R21Q6ZMI0 780 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 LINC00523Q86TU6 105 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 TRAM1L1Q8N609 369 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 DNAAF3Q8N9W5 541 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 OR4K2Q8NGD2 314 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 PTCD2Q8WV60 388 aaKnown RBP12.3□□□□□ -0.44
CHPF2-202ENST00000465601 COX14Q96I36 57 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 FRMD8Q9BZ67 464 aaPredicted RBP12.3□□□□□ -0.44
CHPF2-202ENST00000465601 DDX47Q9H0S4 455 aaKnown RBP12.3□□□□□ -0.44
CHPF2-202ENST00000465601 ARFGAP3Q9NP61 516 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 IL26Q9NPH9 171 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.3□□□□□ -0.44
CHPF2-202ENST00000465601 NFKBIL1Q9UBC1 381 aaPredicted RBP12.3□□□□□ -0.44
CHPF2-202ENST00000465601 OAS3Q9Y6K5 1087 aaKnown RBP12.3□□□□□ -0.44
CHPF2-202ENST00000465601 PLXNB3Q9ULL4 1909 aa12.3□□□□□ -0.44
CHPF2-202ENST00000465601 PRSS38A1L453 326 aa12.29□□□□□ -0.44
CHPF2-202ENST00000465601 NEMP2A6NFY4 417 aa12.29□□□□□ -0.44
CHPF2-202ENST00000465601 TRIM38O00635 465 aa12.29□□□□□ -0.44
CHPF2-202ENST00000465601 LDB2O43679 373 aa12.29□□□□□ -0.44
CHPF2-202ENST00000465601 UGT1A9O60656 530 aa12.29□□□□□ -0.44
CHPF2-202ENST00000465601 CRTAMO95727 393 aa12.29□□□□□ -0.44
CHPF2-202ENST00000465601 CELA2BP08218 269 aaPredicted RBP12.29□□□□□ -0.44
CHPF2-202ENST00000465601 GIMD1P0DJR0 217 aa12.29□□□□□ -0.44
CHPF2-202ENST00000465601 UGT1A6P19224 532 aa12.29□□□□□ -0.44
CHPF2-202ENST00000465601 UGT1A1P22309 533 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms