RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 ARMC12Q5T9G4 340 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 LRRC66Q68CR7 880 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 TMCO3Q6UWJ1 677 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 CEACAM20Q6UY09 585 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 GALNT13Q8IUC8 556 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 RAVER1Q8IY67 606 aaKnown RBP17.18■□□□□ 0.34
HMGN1-210ENST00000464078 PIH1D2Q8WWB5 315 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 AP2M1Q96CW1 435 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 COX14Q96I36 57 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 SLC38A3Q99624 504 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 TRIM7Q9C029 511 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 ZMYND15Q9H091 742 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 ABCG8Q9H221 673 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 TRIT1Q9H3H1 467 aaKnown RBP17.18■□□□□ 0.34
HMGN1-210ENST00000464078 SARS2Q9NP81 518 aaKnown RBP17.18■□□□□ 0.34
HMGN1-210ENST00000464078 VPS18Q9P253 973 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 NKX2-8O15522 239 aa17.17■□□□□ 0.34
HMGN1-210ENST00000464078 FZD6O60353 706 aa17.17■□□□□ 0.34
HMGN1-210ENST00000464078 GP1BBP13224 206 aa17.17■□□□□ 0.34
HMGN1-210ENST00000464078 TNFAIP3P21580 790 aa17.17■□□□□ 0.34
HMGN1-210ENST00000464078 PCK1P35558 622 aa17.17■□□□□ 0.34
HMGN1-210ENST00000464078 MMP13P45452 471 aa17.17■□□□□ 0.34
HMGN1-210ENST00000464078 EPHA4P54764 986 aa17.17■□□□□ 0.34
HMGN1-210ENST00000464078 MC1RQ01726 317 aa17.17■□□□□ 0.34
HMGN1-210ENST00000464078 ABHD18Q0P651 414 aa17.17■□□□□ 0.34
HMGN1-210ENST00000464078 RBM43Q6ZSC3 357 aaKnown RBP17.17■□□□□ 0.34
HMGN1-210ENST00000464078 APTXQ7Z2E3 356 aaKnown RBP17.17■□□□□ 0.34
HMGN1-210ENST00000464078 NRSN1Q8IZ57 195 aa17.17■□□□□ 0.34
HMGN1-210ENST00000464078 ATPAF2Q8N5M1 289 aa17.17■□□□□ 0.34
HMGN1-210ENST00000464078 AHCYL2Q96HN2 611 aaKnown RBP17.17■□□□□ 0.34
HMGN1-210ENST00000464078 TMEM98Q9Y2Y6 226 aa17.17■□□□□ 0.34
HMGN1-210ENST00000464078 A0A0J9YYE9 177 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 LOC101059948A0A1B0GTJ6 334 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 MAP3K6O95382 1288 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 DLGAP3O95886 979 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 TRBC1P01850 177 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 OAS2P29728 719 aaKnown RBP17.16■□□□□ 0.34
HMGN1-210ENST00000464078 ARL4AP40617 200 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 MAXP61244 160 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 MYL5Q02045 173 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 HHEXQ03014 270 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 MAP7Q14244 749 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 PTPRRQ15256 657 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 MARC1Q5VT66 337 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 ALG1LQ6GMV1 187 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 TIPARPQ7Z3E1 657 aaKnown RBP17.16■□□□□ 0.34
HMGN1-210ENST00000464078 POLNQ7Z5Q5 900 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 TRIM74Q86UV6 250 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 ZNF761Q86XN6 746 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-210ENST00000464078 NDUFAF2Q8N183 169 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 NSMCE1Q8WV22 266 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 APOBEC4Q8WW27 367 aaKnown RBP17.16■□□□□ 0.34
HMGN1-210ENST00000464078 STARD8Q92502 1023 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 SCAMP4Q969E2 229 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 CSPG4P5Q96PW8 444 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 EPB41L1Q9H4G0 881 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 ETNK2Q9NVF9 386 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 CD84Q9UIB8 345 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 SCINQ9Y6U3 715 aa17.16■□□□□ 0.34
HMGN1-210ENST00000464078 A6NCN8 305 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 TMCO5BA8MYB1 307 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 STK17BO94768 372 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 EML2O95834 649 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 PDHA1P08559 390 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 ANKRD34CP0C6C1 535 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 PRKAR1AP10644 381 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 GZMAP12544 262 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 CTPS1P17812 591 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 SERPINB6P35237 376 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 STC1P52823 247 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 PTSQ03393 145 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 IGFBP7Q16270 282 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 RFLNAQ6ZTI6 216 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 MARK2Q7KZI7 788 aaKnown RBP17.15■□□□□ 0.34
HMGN1-210ENST00000464078 TEX26Q8N6G2 289 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 EXD1Q8NHP7 514 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 SH3KBP1Q96B97 665 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 CTRCQ99895 268 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 HERPUD2Q9BSE4 406 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 STN1Q9H668 368 aaKnown RBP17.15■□□□□ 0.34
HMGN1-210ENST00000464078 CHMP5Q9NZZ3 219 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 DNPEPQ9ULA0 475 aa17.15■□□□□ 0.34
HMGN1-210ENST00000464078 SPENQ96T58 3664 aaKnown RBP17.15■□□□□ 0.34
HMGN1-210ENST00000464078 MN1Q10571 1320 aaPredicted RBP17.15■□□□□ 0.34
HMGN1-210ENST00000464078 DNAJC6O75061 913 aa17.14■□□□□ 0.33
HMGN1-210ENST00000464078 SLC2A4P14672 509 aa17.14■□□□□ 0.33
HMGN1-210ENST00000464078 AMPD1P23109 780 aa17.14■□□□□ 0.33
HMGN1-210ENST00000464078 IL1R2P27930 398 aa17.14■□□□□ 0.33
HMGN1-210ENST00000464078 STAT5AP42229 794 aa17.14■□□□□ 0.33
HMGN1-210ENST00000464078 LACTB2Q53H82 288 aaPredicted RBP17.14■□□□□ 0.33
HMGN1-210ENST00000464078 BOLA3Q53S33 107 aa17.14■□□□□ 0.33
HMGN1-210ENST00000464078 LRRC49Q8IUZ0 686 aa17.14■□□□□ 0.33
HMGN1-210ENST00000464078 UNC5BQ8IZJ1 945 aa17.14■□□□□ 0.33
HMGN1-210ENST00000464078 AVL9Q8NBF6 648 aa17.14■□□□□ 0.33
HMGN1-210ENST00000464078 ABHD17AQ96GS6 310 aa17.14■□□□□ 0.33
HMGN1-210ENST00000464078 AGAP2Q99490 1192 aa17.14■□□□□ 0.33
HMGN1-210ENST00000464078 ZNF71Q9NQZ8 489 aaPredicted RBP17.14■□□□□ 0.33
HMGN1-210ENST00000464078 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.14■□□□□ 0.33
HMGN1-210ENST00000464078 SIDT1Q9NXL6 827 aaKnown RBP17.14■□□□□ 0.33
HMGN1-210ENST00000464078 CNOT8Q9UFF9 292 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms