RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 GPR26Q8NDV2 337 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 SPATA4Q8NEY3 305 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 DTX3LQ8TDB6 740 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 IL21RQ9HBE5 538 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 NEU2Q9Y3R4 380 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 GLYATL1P3A0A0U1RQE8 302 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 NEMP2A6NFY4 417 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 SLC30A4O14863 429 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 FLRT2O43155 660 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 JUNDP17535 347 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 TPH1P17752 444 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 EPHA8P29322 1005 aaPredicted RBP19.68■□□□□ 0.74
COL9A3-204ENST00000463487 MAGEA6P43360 314 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 SKIDA1Q1XH10 827 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 PHYKPLQ8IUZ5 450 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 PPIL6Q8IXY8 311 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 PHACTR4Q8IZ21 702 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 PPHLN1Q8NEY8 458 aaKnown RBP19.68■□□□□ 0.74
COL9A3-204ENST00000463487 OR4K2Q8NGD2 314 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 STYXQ8WUJ0 223 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 TBATAQ96M53 351 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 KRT12Q99456 494 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 BFARQ9NZS9 450 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 SPASTQ9UBP0 616 aa19.68■□□□□ 0.74
COL9A3-204ENST00000463487 APOBEC3BQ9UH17 382 aaKnown RBP19.68■□□□□ 0.74
COL9A3-204ENST00000463487 INPP4BO15327 924 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 ADRA1DP25100 572 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 GRK6P43250 576 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 NPY2RP49146 381 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 SRP54P61011 504 aaKnown RBP19.67■□□□□ 0.74
COL9A3-204ENST00000463487 IL9RQ01113 521 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 KCNJ11Q14654 390 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 ARMC3Q5W041 872 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 KDM7AQ6ZMT4 941 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 JAMLQ86YT9 394 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 MNS1Q8NEH6 495 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 RANBP9Q96S59 729 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 RTKNQ9BST9 563 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 IL22Q9GZX6 179 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 SLC32A1Q9H598 525 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 XAB2Q9HCS7 855 aaKnown RBP19.67■□□□□ 0.74
COL9A3-204ENST00000463487 IL26Q9NPH9 171 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 MOSPD1Q9UJG1 213 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 TMEM131Q92545 1883 aa19.67■□□□□ 0.74
COL9A3-204ENST00000463487 SMAPO00193 183 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 LDB2O43679 373 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 BUD23O43709 281 aaKnown RBP19.66■□□□□ 0.74
COL9A3-204ENST00000463487 SLC25A14O95258 325 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-204ENST00000463487 ASMTLO95671 621 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 SOD1P00441 154 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 TNFP01375 233 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 ALPPL2P10696 532 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 MLNP12872 115 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 CTSEP14091 401 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 PTGIRP43119 386 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 ZNF140P52738 457 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-204ENST00000463487 HK3P52790 923 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 TERF1P54274 439 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 EIF2B5Q13144 721 aaKnown RBP19.66■□□□□ 0.74
COL9A3-204ENST00000463487 MSLNQ13421 630 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-204ENST00000463487 RSPO4Q2I0M5 234 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-204ENST00000463487 PRAMEF14Q5SWL7 426 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 LRRC8BQ6P9F7 803 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 FAM151BQ6UXP7 276 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 ZNF572Q7Z3I7 529 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-204ENST00000463487 HID1Q8IV36 788 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 PELI3Q8N2H9 469 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 FSTL5Q8N475 847 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-204ENST00000463487 MCUQ8NE86 351 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 CPT1BQ92523 772 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 PEX13Q92968 403 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 GLYATL1Q969I3 302 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 VPS35Q96QK1 796 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 AGAP2Q99490 1192 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 LGR4Q9BXB1 951 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 ZCCHC2Q9C0B9 1178 aaKnown RBP19.66■□□□□ 0.74
COL9A3-204ENST00000463487 PIH1D1Q9NWS0 290 aaKnown RBP19.66■□□□□ 0.74
COL9A3-204ENST00000463487 VPS18Q9P253 973 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 SLC30A1Q9Y6M5 507 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 DGKBQ9Y6T7 804 aa19.66■□□□□ 0.74
COL9A3-204ENST00000463487 FRYLO94915 3013 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 PRSS38A1L453 326 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 FAM187AA6NFU0 413 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 TMEM202A6NGA9 273 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 FADS2P1A8MWK0 482 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 GPR89AB7ZAQ6 455 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 PIAS2O75928 621 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 PRAMEF1O95521 474 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 GPR89BP0CG08 455 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 ITGALP20701 1170 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 GRIA1P42261 906 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 SESN2P58004 480 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-204ENST00000463487 ALG11Q2TAA5 492 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 ZNF542PQ5EBM4 170 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 PCID2Q5JVF3 399 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 TPRG1LQ5T0D9 272 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 CERCAMQ5T4B2 595 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 RD3Q7Z3Z2 195 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 HOOK3Q86VS8 718 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 NAXDQ8IW45 347 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms