RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 BECN1Q14457 450 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 DPCR1Q3MIW9 517 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 ATP1A1-AS1Q5TC04 95 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 DCUN1D2Q6PH85 259 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 ADAMTSL4Q6UY14 1074 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 RFX8Q6ZV50 586 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 TSPAN33Q86UF1 283 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 NLRP8Q86W28 1048 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 GALNT13Q8IUC8 556 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 CCDC13Q8IYE1 715 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 ESX1Q8N693 406 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 TEX19Q8NA77 164 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 PDCD6IPQ8WUM4 868 aaKnown RBP10.78□□□□□ -0.68
CBX3-205ENST00000462165 NCSTNQ92542 709 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 MCCC1Q96RQ3 725 aaPredicted RBP10.78□□□□□ -0.68
CBX3-205ENST00000462165 KCTD15Q96SI1 283 aaPredicted RBP10.78□□□□□ -0.68
CBX3-205ENST00000462165 SNRNP25Q9BV90 132 aaKnown RBP10.78□□□□□ -0.68
CBX3-205ENST00000462165 FAM207AQ9NSI2 230 aaPredicted RBP10.78□□□□□ -0.68
CBX3-205ENST00000462165 DACH1Q9UI36 760 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 TMEM98Q9Y2Y6 226 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 MRPS18BQ9Y676 258 aaKnown RBP10.78□□□□□ -0.68
CBX3-205ENST00000462165 RPS6KL1Q9Y6S9 549 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 PRRC2CQ9Y520 2896 aaKnown RBP10.78□□□□□ -0.68
CBX3-205ENST00000462165 MYO9AB2RTY4 2548 aa10.78□□□□□ -0.68
CBX3-205ENST00000462165 CELSR2Q9HCU4 2923 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 MKRN2OSH3BPM6 223 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 K7EM74 188 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 MAP3K6O95382 1288 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 EML2O95834 649 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 PEX11BO96011 259 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 NOP2P46087 812 aaKnown RBP10.77□□□□□ -0.69
CBX3-205ENST00000462165 ZNF135P52742 658 aaPredicted RBP10.77□□□□□ -0.69
CBX3-205ENST00000462165 COPB1P53618 953 aaKnown RBP10.77□□□□□ -0.69
CBX3-205ENST00000462165 EPHA4P54764 986 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 UBE2HP62256 183 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 TRAF2Q12933 501 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 ZNF235Q14590 738 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 SYCP1Q15431 976 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 RALGPS1Q5JS13 557 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 USP45Q70EL2 814 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 ZNF765Q7L2R6 523 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 TP53INP2Q8IXH6 220 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 PGBD5Q8N414 524 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 SH3KBP1Q96B97 665 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 AP2M1Q96CW1 435 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 COX14Q96I36 57 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 PEBP4Q96S96 227 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 MGME1Q9BQP7 344 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 ABCG8Q9H221 673 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 STN1Q9H668 368 aaKnown RBP10.77□□□□□ -0.69
CBX3-205ENST00000462165 NOD2Q9HC29 1040 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 SEPT11Q9NVA2 429 aaKnown RBP10.77□□□□□ -0.69
CBX3-205ENST00000462165 SIDT1Q9NXL6 827 aaKnown RBP10.77□□□□□ -0.69
CBX3-205ENST00000462165 PLEKHB1Q9UF11 243 aaPredicted RBP10.77□□□□□ -0.69
CBX3-205ENST00000462165 CD84Q9UIB8 345 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 BOLA1Q9Y3E2 137 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 PCDHB3Q9Y5E6 796 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 NOTCH2Q04721 2471 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 ITPR2Q14571 2701 aa10.77□□□□□ -0.69
CBX3-205ENST00000462165 TNRC6AQ8NDV7 1962 aaKnown RBP10.76□□□□□ -0.69
CBX3-205ENST00000462165 DNAJC6O75061 913 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 PGLSO95336 258 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 PYGLP06737 847 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 KRT7P08729 469 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 ANKRD34CP0C6C1 535 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 TNFAIP3P21580 790 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 PSMA2P25787 234 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 HCAR3P49019 387 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 NFATC2Q13469 925 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 DPYSQ14117 519 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 PTPRRQ15256 657 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 PPP6R3Q5H9R7 873 aaPredicted RBP10.76□□□□□ -0.69
CBX3-205ENST00000462165 CT47A1Q5JQC4 288 aaPredicted RBP10.76□□□□□ -0.69
CBX3-205ENST00000462165 HIST2H2BCQ6DN03 193 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 CAPRIN2Q6IMN6 1127 aaKnown RBP10.76□□□□□ -0.69
CBX3-205ENST00000462165 IYDQ6PHW0 289 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 RFLNAQ6ZTI6 216 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 ASB18Q6ZVZ8 466 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 MARK2Q7KZI7 788 aaKnown RBP10.76□□□□□ -0.69
CBX3-205ENST00000462165 SLC9B2Q86UD5 537 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 TRIM74Q86UV6 250 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 PSTKQ8IV42 348 aaKnown RBP10.76□□□□□ -0.69
CBX3-205ENST00000462165 MCOLN2Q8IZK6 566 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 ARFGAP1Q8N6T3 406 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 FNIP1Q8TF40 1166 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 PIH1D2Q8WWB5 315 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 HS3ST6Q96QI5 342 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 AGPAT1Q99943 283 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.76□□□□□ -0.69
CBX3-205ENST00000462165 EPB41L1Q9H4G0 881 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 PRDM8Q9NQV8 689 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 CWC15Q9P013 229 aaKnown RBP10.76□□□□□ -0.69
CBX3-205ENST00000462165 POLHQ9Y253 713 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 SIK3Q9Y2K2 1263 aa10.76□□□□□ -0.69
CBX3-205ENST00000462165 PCYT1BQ9Y5K3 369 aaPredicted RBP10.76□□□□□ -0.69
CBX3-205ENST00000462165 MN1Q10571 1320 aaPredicted RBP10.76□□□□□ -0.69
CBX3-205ENST00000462165 SHANK1Q9Y566 2161 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 A0A0U1RQS6 177 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 A6NCN8 305 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 FZD6O60353 706 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms