RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 KRT7P08729 469 aa17.77■□□□□ 0.44
SSB-206ENST00000461708 HNRNPH3P31942 346 aaKnown RBP17.77■□□□□ 0.44
SSB-206ENST00000461708 SSR1P43307 286 aaKnown RBP17.77■□□□□ 0.44
SSB-206ENST00000461708 FASLGP48023 281 aa17.77■□□□□ 0.44
SSB-206ENST00000461708 LIMK2P53671 638 aa17.77■□□□□ 0.44
SSB-206ENST00000461708 EPHB1P54762 984 aa17.77■□□□□ 0.44
SSB-206ENST00000461708 GPLD1P80108 840 aa17.77■□□□□ 0.44
SSB-206ENST00000461708 ITKQ08881 620 aa17.77■□□□□ 0.44
SSB-206ENST00000461708 BIRC2Q13490 618 aa17.77■□□□□ 0.44
SSB-206ENST00000461708 IHHQ14623 411 aa17.77■□□□□ 0.44
SSB-206ENST00000461708 NFKBIBQ15653 356 aa17.77■□□□□ 0.44
SSB-206ENST00000461708 KCTD6Q8NC69 237 aa17.77■□□□□ 0.44
SSB-206ENST00000461708 EXD1Q8NHP7 514 aa17.77■□□□□ 0.44
SSB-206ENST00000461708 ARRDC2Q8TBH0 407 aa17.77■□□□□ 0.44
SSB-206ENST00000461708 ZNF564Q8TBZ8 553 aaPredicted RBP17.77■□□□□ 0.44
SSB-206ENST00000461708 SCAMP4Q969E2 229 aa17.77■□□□□ 0.44
SSB-206ENST00000461708 NUDT22Q9BRQ3 303 aa17.77■□□□□ 0.44
SSB-206ENST00000461708 RBM22Q9NW64 420 aaKnown RBP eCLIP17.77■□□□□ 0.44
SSB-206ENST00000461708 FOXJ2Q9P0K8 574 aa17.77■□□□□ 0.44
SSB-206ENST00000461708 SDK2Q58EX2 2172 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 IGHV1OR21-1A0A087WYE8 117 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 PPM1DO15297 605 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 ACTR1BP42025 376 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 MAPK10P53779 464 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 ACTR1AP61163 376 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 DSC2Q02487 901 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 MANEAQ5SRI9 462 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 DOK6Q6PKX4 331 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 RFLNAQ6ZTI6 216 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 LUZP1Q86V48 1076 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 ZFAND4Q86XD8 727 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 GALNT13Q8IUC8 556 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 CCDC112Q8NEF3 446 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 PATE1Q8WXA2 126 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 TAAR9Q96RI9 348 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 SUDS3Q9H7L9 328 aaPredicted RBP17.76■□□□□ 0.43
SSB-206ENST00000461708 PDP2Q9P2J9 529 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 CD84Q9UIB8 345 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 TMEM98Q9Y2Y6 226 aa17.76■□□□□ 0.43
SSB-206ENST00000461708 GYPCP04921 128 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 MAN1A1P33908 653 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 ATP13A4Q4VNC1 1196 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 SFRP1Q8N474 314 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 ZSCAN1Q8NBB4 408 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 AGBL5Q8NDL9 886 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 CPLX3Q8WVH0 158 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 HDAC11Q96DB2 347 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 CCDC74BQ96LY2 380 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 RIOK2Q9BVS4 552 aaKnown RBP17.75■□□□□ 0.43
SSB-206ENST00000461708 DDA1Q9BW61 102 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 RMI1Q9H9A7 625 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 PCDH9Q9HC56 1237 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 KCNK4Q9NYG8 393 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 CTTNBP2NLQ9P2B4 639 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 CHKBQ9Y259 395 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 PCDHGA4Q9Y5G9 962 aa17.75■□□□□ 0.43
SSB-206ENST00000461708 A0A0U1RQS6 177 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 ZNF487B1APH4 448 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 STMND1H3BQB6 276 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 H2AFZP0C0S5 128 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 THRAP10827 490 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 FGF3P11487 239 aaPredicted RBP17.74■□□□□ 0.43
SSB-206ENST00000461708 SFTPCP11686 197 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 CCL4P13236 92 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 NIPAL4Q0D2K0 466 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 LINC00303Q3SY05 128 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 H2AFVQ71UI9 128 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 VSIG1Q86XK7 387 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 PQLC3Q8N755 202 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 SMIM14Q96QK8 99 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 AGAP2Q99490 1192 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 ASPSCR1Q9BZE9 553 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 PLEKHM1Q9Y4G2 1056 aa17.74■□□□□ 0.43
SSB-206ENST00000461708 SYCE3A1L190 88 aa17.73■□□□□ 0.43
SSB-206ENST00000461708 B4E171 279 aa17.73■□□□□ 0.43
SSB-206ENST00000461708 DNAJC6O75061 913 aa17.73■□□□□ 0.43
SSB-206ENST00000461708 HLA-DQB2P05538 268 aa17.73■□□□□ 0.43
SSB-206ENST00000461708 CSF2RBP32927 897 aa17.73■□□□□ 0.43
SSB-206ENST00000461708 CSTF2P33240 577 aaKnown RBP eCLIP17.73■□□□□ 0.43
SSB-206ENST00000461708 TSPAN7P41732 249 aa17.73■□□□□ 0.43
SSB-206ENST00000461708 GBE1Q04446 702 aa17.73■□□□□ 0.43
SSB-206ENST00000461708 SLC18A3Q16572 532 aa17.73■□□□□ 0.43
SSB-206ENST00000461708 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.73■□□□□ 0.43
SSB-206ENST00000461708 HENMT1Q5T8I9 393 aaKnown RBP17.73■□□□□ 0.43
SSB-206ENST00000461708 TMEM71Q6P5X7 295 aa17.73■□□□□ 0.43
SSB-206ENST00000461708 TRIM74Q86UV6 250 aa17.73■□□□□ 0.43
SSB-206ENST00000461708 CCDC13Q8IYE1 715 aa17.73■□□□□ 0.43
SSB-206ENST00000461708 EXD3Q8N9H8 876 aa17.73■□□□□ 0.43
SSB-206ENST00000461708 SLC37A2Q8TED4 501 aa17.73■□□□□ 0.43
SSB-206ENST00000461708 CTNNBL1Q8WYA6 563 aaPredicted RBP17.73■□□□□ 0.43
SSB-206ENST00000461708 ZNF830Q96NB3 372 aaPredicted RBP17.73■□□□□ 0.43
SSB-206ENST00000461708 SARS2Q9NP81 518 aaKnown RBP17.73■□□□□ 0.43
SSB-206ENST00000461708 DTLQ9NZJ0 730 aa17.73■□□□□ 0.43
SSB-206ENST00000461708 CNOT6Q9ULM6 557 aaKnown RBP17.73■□□□□ 0.43
SSB-206ENST00000461708 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.73■□□□□ 0.431e-7■□□□□ 9.6
SSB-206ENST00000461708 UBR5O95071 2799 aaPredicted RBP17.73■□□□□ 0.43
SSB-206ENST00000461708 C1orf232A0A0U1RR37 186 aa17.72■□□□□ 0.43
SSB-206ENST00000461708 ANKRD66B4E2M5 251 aa17.72■□□□□ 0.43
SSB-206ENST00000461708 GOLGA6L19H0YKK7 550 aa17.72■□□□□ 0.43
SSB-206ENST00000461708 CLDN7O95471 211 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms