RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 HELZ2Q9BYK8 2649 aaKnown RBP22.65■■□□□ 1.22
PTPN4-207ENST00000460162 AKR1B10O60218 316 aa22.65■■□□□ 1.22
PTPN4-207ENST00000460162 PRLP01236 227 aa22.65■■□□□ 1.22
PTPN4-207ENST00000460162 LIPCP11150 499 aa22.65■■□□□ 1.22
PTPN4-207ENST00000460162 KDELR1P24390 212 aa22.65■■□□□ 1.22
PTPN4-207ENST00000460162 ACTR1BP42025 376 aa22.65■■□□□ 1.22
PTPN4-207ENST00000460162 ACTR1AP61163 376 aa22.65■■□□□ 1.22
PTPN4-207ENST00000460162 PPIDQ08752 370 aaKnown RBP22.65■■□□□ 1.22
PTPN4-207ENST00000460162 NIPAL4Q0D2K0 466 aa22.65■■□□□ 1.22
PTPN4-207ENST00000460162 SLC10A2Q12908 348 aaPredicted RBP22.65■■□□□ 1.22
PTPN4-207ENST00000460162 PHF19Q5T6S3 580 aa22.65■■□□□ 1.22
PTPN4-207ENST00000460162 TRIM74Q86UV6 250 aa22.65■■□□□ 1.22
PTPN4-207ENST00000460162 PIM3Q86V86 326 aa22.65■■□□□ 1.22
PTPN4-207ENST00000460162 CCNYQ8ND76 341 aa22.65■■□□□ 1.22
PTPN4-207ENST00000460162 EXD1Q8NHP7 514 aa22.65■■□□□ 1.22
PTPN4-207ENST00000460162 RAPGEF5Q92565 580 aa22.65■■□□□ 1.22
PTPN4-207ENST00000460162 COX14Q96I36 57 aa22.65■■□□□ 1.22
PTPN4-207ENST00000460162 CCNL2Q96S94 520 aaPredicted RBP22.65■■□□□ 1.22
PTPN4-207ENST00000460162 AKAP7Q9P0M2 348 aaPredicted RBP22.65■■□□□ 1.22
PTPN4-207ENST00000460162 LRRD1A4D1F6 860 aa22.64■■□□□ 1.21
PTPN4-207ENST00000460162 B4GAT1O43505 415 aa22.64■■□□□ 1.21
PTPN4-207ENST00000460162 ITIH1P19827 911 aa22.64■■□□□ 1.21
PTPN4-207ENST00000460162 IFI35P80217 286 aaPredicted RBP22.64■■□□□ 1.21
PTPN4-207ENST00000460162 CFHR1Q03591 330 aa22.64■■□□□ 1.21
PTPN4-207ENST00000460162 MESDQ14696 234 aa22.64■■□□□ 1.21
PTPN4-207ENST00000460162 PYCR3Q53H96 274 aa22.64■■□□□ 1.21
PTPN4-207ENST00000460162 GALNT13Q8IUC8 556 aa22.64■■□□□ 1.21
PTPN4-207ENST00000460162 PLD5Q8N7P1 536 aa22.64■■□□□ 1.21
PTPN4-207ENST00000460162 PATE1Q8WXA2 126 aa22.64■■□□□ 1.21
PTPN4-207ENST00000460162 TTC9Q92623 222 aa22.64■■□□□ 1.21
PTPN4-207ENST00000460162 AGAP2Q99490 1192 aa22.64■■□□□ 1.21
PTPN4-207ENST00000460162 RIOK2Q9BVS4 552 aaKnown RBP22.64■■□□□ 1.21
PTPN4-207ENST00000460162 SEMA6CQ9H3T2 930 aa22.64■■□□□ 1.21
PTPN4-207ENST00000460162 RDH14Q9HBH5 336 aa22.64■■□□□ 1.21
PTPN4-207ENST00000460162 VPS18Q9P253 973 aa22.64■■□□□ 1.21
PTPN4-207ENST00000460162 TMEM98Q9Y2Y6 226 aa22.64■■□□□ 1.21
PTPN4-207ENST00000460162 C1orf232A0A0U1RR37 186 aa22.63■■□□□ 1.21
PTPN4-207ENST00000460162 HGSO14964 777 aaPredicted RBP22.63■■□□□ 1.21
PTPN4-207ENST00000460162 CLDN7O95471 211 aa22.63■■□□□ 1.21
PTPN4-207ENST00000460162 TPM1P09493 284 aa22.63■■□□□ 1.21
PTPN4-207ENST00000460162 ALDH4A1P30038 563 aa22.63■■□□□ 1.21
PTPN4-207ENST00000460162 OR1D5P58170 312 aa22.63■■□□□ 1.21
PTPN4-207ENST00000460162 AMZ1Q400G9 498 aa22.63■■□□□ 1.21
PTPN4-207ENST00000460162 SLC9A4Q6AI14 798 aa22.63■■□□□ 1.21
PTPN4-207ENST00000460162 RHOT2Q8IXI1 618 aa22.63■■□□□ 1.21
PTPN4-207ENST00000460162 ZNF843Q8N446 348 aa22.63■■□□□ 1.21
PTPN4-207ENST00000460162 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.63■■□□□ 1.21
PTPN4-207ENST00000460162 LRRN4Q8WUT4 740 aa22.63■■□□□ 1.21
PTPN4-207ENST00000460162 B3GNT4Q9C0J1 378 aa22.63■■□□□ 1.21
PTPN4-207ENST00000460162 ABHD10Q9NUJ1 306 aa22.63■■□□□ 1.21
PTPN4-207ENST00000460162 PKD2L2Q9NZM6 624 aa22.63■■□□□ 1.21
PTPN4-207ENST00000460162 KCNK1O00180 336 aa22.62■■□□□ 1.21
PTPN4-207ENST00000460162 INPP4BO15327 924 aa22.62■■□□□ 1.21
PTPN4-207ENST00000460162 MFAP3LO75121 409 aa22.62■■□□□ 1.21
PTPN4-207ENST00000460162 MTA2O94776 668 aa22.62■■□□□ 1.21
PTPN4-207ENST00000460162 MMP2P08253 660 aa22.62■■□□□ 1.21
PTPN4-207ENST00000460162 CD82P27701 267 aa22.62■■□□□ 1.21
PTPN4-207ENST00000460162 CD86P42081 329 aa22.62■■□□□ 1.21
PTPN4-207ENST00000460162 ARHGAP25P42331 645 aa22.62■■□□□ 1.21
PTPN4-207ENST00000460162 ZBTB17Q13105 803 aa22.62■■□□□ 1.21
PTPN4-207ENST00000460162 C16orf72Q14CZ0 275 aa22.62■■□□□ 1.21
PTPN4-207ENST00000460162 HENMT1Q5T8I9 393 aaKnown RBP22.62■■□□□ 1.21
PTPN4-207ENST00000460162 MARK2Q7KZI7 788 aaKnown RBP22.62■■□□□ 1.21
PTPN4-207ENST00000460162 SLC35G2Q8TBE7 412 aa22.62■■□□□ 1.21
PTPN4-207ENST00000460162 NUDT22Q9BRQ3 303 aa22.62■■□□□ 1.21
PTPN4-207ENST00000460162 ADGRE3Q9BY15 652 aa22.62■■□□□ 1.21
PTPN4-207ENST00000460162 COL6A6A6NMZ7 2263 aa22.62■■□□□ 1.21
PTPN4-207ENST00000460162 ZNF462Q96JM2 2506 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 PRAMEF33A0A0G2JMD5 474 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 RGSL1A5PLK6 1076 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 ANKRD66B4E2M5 251 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 PRAMEF10O60809 474 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 JCHAINP01591 159 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 ETV5P41161 510 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 FASLGP48023 281 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 SPINT3P49223 89 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 QPCTQ16769 361 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 SKOR2Q2VWA4 1001 aaPredicted RBP22.61■■□□□ 1.21
PTPN4-207ENST00000460162 VSTM4Q8IW00 320 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 CNTD1Q8N815 330 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 CCHCR1Q8TD31 782 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 DPYSL5Q9BPU6 564 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 MLPHQ9BV36 600 aaPredicted RBP22.61■■□□□ 1.21
PTPN4-207ENST00000460162 PLEKHM1Q9Y4G2 1056 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 HEY1Q9Y5J3 304 aa22.61■■□□□ 1.21
PTPN4-207ENST00000460162 C3orf70A6NLC5 250 aaPredicted RBP22.6■■□□□ 1.21
PTPN4-207ENST00000460162 APOL1O14791 398 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 PPP1R12AO14974 1030 aaPredicted RBP22.6■■□□□ 1.21
PTPN4-207ENST00000460162 PPM1DO15297 605 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 DNAJC6O75061 913 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 ASMTLO95671 621 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 CD1CP29017 333 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 MAPK10P53779 464 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 GPLD1P80108 840 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 TRA2AQ13595 282 aaKnown RBP eCLIP22.6■■□□□ 1.21
PTPN4-207ENST00000460162 PDK1Q15118 436 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 LRRC38Q5VT99 294 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 OR4D9Q8NGE8 314 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 CCDC74BQ96LY2 380 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 CCDC42Q96M95 316 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms