RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 CINPQ9BW66 212 aaPredicted RBP4.99□□□□□ -1.61
PCDH9-203ENST00000456367 MKRN2Q9H000 416 aaKnown RBP4.99□□□□□ -1.61
PCDH9-203ENST00000456367 AP5M1Q9H0R1 490 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 KCNN2Q9H2S1 579 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 CCM2LQ9NUG4 571 aaPredicted RBP4.99□□□□□ -1.61
PCDH9-203ENST00000456367 STK32BQ9NY57 414 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 OPTCQ9UBM4 332 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 CRLS1Q9UJA2 301 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 COQ4Q9Y3A0 265 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 CNTNAP2Q9UHC6 1331 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 KCNK1O00180 336 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 AKAP8O43823 692 aaKnown RBP4.99□□□□□ -1.61
PCDH9-203ENST00000456367 CAPN15O75808 1086 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 PSMD10O75832 226 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 MAP3K6O95382 1288 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 CHRNA1P02708 482 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 GSTM1P09488 218 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 CLTBP09497 229 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 T-ENOLP0DO92 83 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 BMP2P12643 396 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 ANXA8P13928 327 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 ZNF7P17097 686 aaPredicted RBP4.99□□□□□ -1.61
PCDH9-203ENST00000456367 MAGP20916 626 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 NOS2P35228 1153 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 MPP2Q14168 576 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 GNA13Q14344 377 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 PFKFB4Q16877 469 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 SLC2A7Q6PXP3 512 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 CYS1Q717R9 158 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 ADAMTSL2Q86TH1 951 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 LAPTM4BQ86VI4 370 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 ZC3H7AQ8IWR0 971 aaKnown RBP4.99□□□□□ -1.61
PCDH9-203ENST00000456367 SCN4BQ8IWT1 228 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 SULF1Q8IWU6 871 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 VGLL2Q8N8G2 317 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 ZNF431Q8TF32 576 aaPredicted RBP4.99□□□□□ -1.61
PCDH9-203ENST00000456367 FAM163AQ96GL9 167 aaPredicted RBP4.99□□□□□ -1.61
PCDH9-203ENST00000456367 ZC3H10Q96K80 434 aaKnown RBP4.99□□□□□ -1.61
PCDH9-203ENST00000456367 DHRS1Q96LJ7 313 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 KIFC1Q9BW19 673 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 ARMC7Q9H6L4 198 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 GPRC5CQ9NQ84 441 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 SAE1Q9UBE0 346 aaPredicted RBP4.99□□□□□ -1.61
PCDH9-203ENST00000456367 UBQLN2Q9UHD9 624 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 AXIN2Q9Y2T1 843 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 VWA7Q9Y334 891 aa4.99□□□□□ -1.61
PCDH9-203ENST00000456367 MAGED1Q9Y5V3 778 aaPredicted RBP4.99□□□□□ -1.61
PCDH9-203ENST00000456367 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.99□□□□□ -1.61
PCDH9-203ENST00000456367 FAM234BA2RU67 622 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 FAM149AA5PLN7 773 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ADRB2P07550 413 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 PRKACAP17612 351 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 MATN1P21941 496 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 PPP3CCP48454 512 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 RPS7P62081 194 aaKnown RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 RPL7AP62424 266 aaKnown RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ALDH6A1Q02252 535 aaKnown RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 DNASE1L3Q13609 305 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ATP6AP1Q15904 470 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 AGAP7PQ5VUJ5 663 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 KHDRBS2Q5VWX1 349 aaKnown RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ANKRD22Q5VYY1 191 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 DUS1LQ6P1R4 473 aaKnown RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 CES3Q6UWW8 571 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ZNF621Q6ZSS3 439 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ILDR2Q71H61 639 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SLC34A3Q8N130 599 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SPERTQ8NA61 448 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 PHC3Q8NDX5 983 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 PIH1D2Q8WWB5 315 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 COL21A1Q96P44 957 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SNX18Q96RF0 628 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 FAM126AQ9BYI3 521 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SYNDIG1Q9H7V2 258 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 PDP1Q9P0J1 537 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 GPN3Q9UHW5 284 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 NUP50Q9UKX7 468 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 RAB23Q9ULC3 237 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 HSPB11Q9Y547 144 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 PIK3C2BO00750 1634 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ERCC6L2Q5T890 1561 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 TTC34A8MYJ7 566 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 FOXO6A8MYZ6 492 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 FAM86B1E9PN63 330 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 PLOD2O00469 737 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ULK1O75385 1050 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 OR2B3O76000 313 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 NR4A1P22736 598 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 STOMP27105 288 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 PLK1P53350 603 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ATP12AP54707 1039 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 PTSQ03393 145 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SEMA5AQ13591 1074 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 FGD3Q5JSP0 725 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 MBLAC2Q68D91 279 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 HMBOX1Q6NT76 420 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 NPNTQ6UXI9 565 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 CHSY3Q70JA7 882 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms