RNA–Protein interactions for RNA: ENST00000455878.2

PSMC4-202, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 1 (best) BASIC

Gene PSMC4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-202ENST00000455878 ATP8A1Q9Y2Q0 1164 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 RNF215Q9Y6U7 377 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 TCRBV7S2A1N4TA0A589 114 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 TSPAN11A1L157 253 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 J3KR12 359 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 KIF2AO00139 706 aaPredicted RBP13.39□□□□□ -0.27
PSMC4-202ENST00000455878 APOL1O14791 398 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 TNFRSF10CO14798 259 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 RECQL5O94762 991 aaPredicted RBP13.39□□□□□ -0.27
PSMC4-202ENST00000455878 MAP3K6O95382 1288 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 HOXC4P09017 264 aaPredicted RBP13.39□□□□□ -0.27
PSMC4-202ENST00000455878 ELFN1P0C7U0 828 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 CSNK1DP48730 415 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 CSRP3P50461 194 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 C14orf28Q4W4Y0 310 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 CERCAMQ5T4B2 595 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 NPNTQ6UXI9 565 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 PIM3Q86V86 326 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 TP53INP2Q8IXH6 220 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 PLD5Q8N7P1 536 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.39□□□□□ -0.27
PSMC4-202ENST00000455878 EXTL1Q92935 676 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 USP7Q93009 1102 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 HAUS1Q96CS2 278 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 MAK16Q9BXY0 300 aaKnown RBP13.39□□□□□ -0.27
PSMC4-202ENST00000455878 CYP4F12Q9HCS2 524 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 IL17BQ9UHF5 180 aa13.39□□□□□ -0.27
PSMC4-202ENST00000455878 HECTD1Q9ULT8 2610 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 CHD5Q8TDI0 1954 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 NAV2Q8IVL1 2488 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 TMEM202A6NGA9 273 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 NUDT21O43809 227 aaKnown RBP13.38□□□□□ -0.27
PSMC4-202ENST00000455878 CST8O60676 142 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 PRAMEF11O60813 436 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 PRKCGP05129 697 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 PECAM1P16284 738 aaPredicted RBP13.38□□□□□ -0.27
PSMC4-202ENST00000455878 TCP1P17987 556 aaKnown RBP13.38□□□□□ -0.27
PSMC4-202ENST00000455878 ITIH1P19827 911 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 CD82P27701 267 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 MMP12P39900 470 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 PAPOLAP51003 745 aaKnown RBP13.38□□□□□ -0.27
PSMC4-202ENST00000455878 KIAA1024LP59773 190 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 GBE1Q04446 702 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 ZFP36L1Q07352 338 aaKnown RBP13.38□□□□□ -0.27
PSMC4-202ENST00000455878 NSUN2Q08J23 767 aaKnown RBP eCLIP13.38□□□□□ -0.27
PSMC4-202ENST00000455878 ACOX1Q15067 660 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 LINC00303Q3SY05 128 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 AMZ1Q400G9 498 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 TMCO3Q6UWJ1 677 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 ATG14Q6ZNE5 492 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 BBS12Q6ZW61 710 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 SLC13A5Q86YT5 568 aaPredicted RBP13.38□□□□□ -0.27
PSMC4-202ENST00000455878 ARHGAP12Q8IWW6 846 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 RASGEF1CQ8N431 466 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 PLA2G15Q8NCC3 412 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 OR1E3Q8WZA6 343 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 FUBP1Q96AE4 644 aaKnown RBP13.38□□□□□ -0.27
PSMC4-202ENST00000455878 PDXPQ96GD0 296 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 CELF6Q96J87 481 aaKnown RBP13.38□□□□□ -0.27
PSMC4-202ENST00000455878 PBKQ96KB5 322 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 CAPZA3Q96KX2 299 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 CINPQ9BW66 212 aaPredicted RBP13.38□□□□□ -0.27
PSMC4-202ENST00000455878 TMEM168Q9H0V1 697 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 LRRC19Q9H756 370 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 MRPL40Q9NQ50 206 aaKnown RBP13.38□□□□□ -0.27
PSMC4-202ENST00000455878 SAR1BQ9Y6B6 198 aa13.38□□□□□ -0.27
PSMC4-202ENST00000455878 PRAMEF33A0A0G2JMD5 474 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 RHPN2P1A8MT19 583 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 A8MX80 341 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 B4DGG1 531 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 CES2O00748 559 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 PRAMEF10O60809 474 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 CPNE6O95741 557 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 FGGP02679 453 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 TUBB4AP04350 444 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 NFKBIAP25963 317 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 ALDH4A1P30038 563 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 TRIM23P36406 574 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 CETN2P41208 172 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 SCNN1BP51168 640 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 RENBPP51606 427 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 KLF1Q13351 362 aaPredicted RBP13.37□□□□□ -0.27
PSMC4-202ENST00000455878 PEX6Q13608 980 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 TFDP2Q14188 446 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 PAFAH1B3Q15102 231 aaKnown RBP13.37□□□□□ -0.27
PSMC4-202ENST00000455878 MAP9Q49MG5 647 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 AFMIDQ63HM1 303 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 PNCKQ6P2M8 343 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 LIPIQ6XZB0 460 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 SPRED1Q7Z699 444 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 ZFAND4Q86XD8 727 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 TSEN2Q8NCE0 465 aaKnown RBP13.37□□□□□ -0.27
PSMC4-202ENST00000455878 FAM118BQ9BPY3 351 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 SLC39A8Q9C0K1 460 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 WDR26Q9H7D7 661 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 KCTD5Q9NXV2 234 aa13.37□□□□□ -0.27
PSMC4-202ENST00000455878 SAE1Q9UBE0 346 aaPredicted RBP13.37□□□□□ -0.27
PSMC4-202ENST00000455878 R3HDM2Q9Y2K5 976 aaKnown RBP13.37□□□□□ -0.27
PSMC4-202ENST00000455878 TJP3O95049 919 aa13.36□□□□□ -0.27
PSMC4-202ENST00000455878 SLC10A2Q12908 348 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms