RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 THADAQ6YHU6 1953 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 KNL1Q8NG31 2342 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 EXOC1LA0A1B0GW35 172 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 IGLON5A6NGN9 336 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 H7C0S8 307 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 K7ESM1 405 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 SLC7A4O43246 635 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 DCXO43602 365 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 PLRG1O43660 514 aaKnown RBP10.94□□□□□ -0.66
SCN9A-205ENST00000454569 SPAG6O75602 509 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 HAUS5O94927 633 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 SYF2O95926 243 aaKnown RBP10.94□□□□□ -0.66
SCN9A-205ENST00000454569 AHSGP02765 367 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 C6P13671 934 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 PHBP35232 272 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 GMPRP36959 345 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 ADPRHP54922 357 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 PPP2CBP62714 309 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 PPP2CAP67775 309 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 PRAMEP78395 509 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 ARHGEF7Q14155 803 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 FRG1Q14331 258 aaKnown RBP10.94□□□□□ -0.66
SCN9A-205ENST00000454569 STAT4Q14765 748 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 PDPK2PQ6A1A2 396 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 NEPROQ6NW34 567 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 ERAP2Q6P179 960 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 NLRP9Q7RTR0 991 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 NDUFAF2Q8N183 169 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 PGBD3Q8N328 593 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 OR4L1Q8NH43 312 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 OR14C36Q8NHC7 312 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 CYTH2Q99418 400 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 PAFAH2Q99487 392 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 MFSD1Q9H3U5 465 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 ITM2CQ9NQX7 267 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 FBXO6Q9NRD1 293 aaPredicted RBP10.94□□□□□ -0.66
SCN9A-205ENST00000454569 MBD1Q9UIS9 605 aaPredicted RBP10.94□□□□□ -0.66
SCN9A-205ENST00000454569 INVSQ9Y283 1065 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 TDRD6O60522 2096 aaKnown RBP10.93□□□□□ -0.66
SCN9A-205ENST00000454569 FAM47DPA6NHR8 397 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 FADS2P1A8MWK0 482 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 K7ESF4 209 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 CD3EAPO15446 510 aaKnown RBP10.93□□□□□ -0.66
SCN9A-205ENST00000454569 SRP72O76094 671 aaKnown RBP10.93□□□□□ -0.66
SCN9A-205ENST00000454569 RECQL5O94762 991 aaPredicted RBP10.93□□□□□ -0.66
SCN9A-205ENST00000454569 PCDH8O95206 1070 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 S1PR4O95977 384 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 ELFN1P0C7U0 828 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 STX2P32856 288 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 RPS9P46781 194 aaKnown RBP10.93□□□□□ -0.66
SCN9A-205ENST00000454569 DGKEP52429 567 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 ELP6Q0PNE2 266 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 BMPR2Q13873 1038 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 ACOX1Q15067 660 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 ATP13A5Q4VNC0 1218 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 HSP90B2PQ58FF3 399 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 ZRANB3Q5FWF4 1079 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 ZNF648Q5T619 568 aaPredicted RBP10.93□□□□□ -0.66
SCN9A-205ENST00000454569 ZNF470Q6ECI4 717 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 CNSTQ6PJW8 725 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 ADGRD1Q6QNK2 874 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 TSSK4Q6SA08 328 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 LRIG3Q6UXM1 1119 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 PACS1Q6VY07 963 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 MARK2Q7KZI7 788 aaKnown RBP10.93□□□□□ -0.66
SCN9A-205ENST00000454569 CNTN4Q8IWV2 1026 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 KRT222Q8N1A0 295 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 SPEM1Q8N4L4 309 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 PLA2G15Q8NCC3 412 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 MZB1Q8WU39 189 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 SLC44A1Q8WWI5 657 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 PEX13Q92968 403 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 TMEM109Q9BVC6 243 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 RIOK2Q9BVS4 552 aaKnown RBP10.93□□□□□ -0.66
SCN9A-205ENST00000454569 FBRSQ9HAH7 460 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 EBF2Q9HAK2 575 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 POLMQ9NP87 494 aaPredicted RBP10.93□□□□□ -0.66
SCN9A-205ENST00000454569 USP36Q9P275 1121 aaKnown RBP10.93□□□□□ -0.66
SCN9A-205ENST00000454569 FBXO5Q9UKT4 447 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 CYP8B1Q9UNU6 501 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 PKP3Q9Y446 797 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 DNAH14Q0VDD8 3507 aa10.93□□□□□ -0.66
SCN9A-205ENST00000454569 TP53BP1Q12888 1972 aaPredicted RBP10.92□□□□□ -0.66
SCN9A-205ENST00000454569 GLYATL1P3A0A0U1RQE8 302 aa10.92□□□□□ -0.66
SCN9A-205ENST00000454569 A0A1W2PPM1 405 aa10.92□□□□□ -0.66
SCN9A-205ENST00000454569 C10orf142B7Z368 130 aa10.92□□□□□ -0.66
SCN9A-205ENST00000454569 NEMP1O14524 444 aa10.92□□□□□ -0.66
SCN9A-205ENST00000454569 RASGRF2O14827 1237 aa10.92□□□□□ -0.66
SCN9A-205ENST00000454569 RAD51BO15315 384 aa10.92□□□□□ -0.66
SCN9A-205ENST00000454569 AP1G1O43747 822 aa10.92□□□□□ -0.66
SCN9A-205ENST00000454569 OR1I1O60431 355 aa10.92□□□□□ -0.66
SCN9A-205ENST00000454569 TCEA3O75764 348 aa10.92□□□□□ -0.66
SCN9A-205ENST00000454569 SOD1P00441 154 aa10.92□□□□□ -0.66
SCN9A-205ENST00000454569 CREB1P16220 341 aa10.92□□□□□ -0.66
SCN9A-205ENST00000454569 ZNF30P17039 623 aa10.92□□□□□ -0.66
SCN9A-205ENST00000454569 MAT2AP31153 395 aaKnown RBP10.92□□□□□ -0.66
SCN9A-205ENST00000454569 SPAM1P38567 509 aa10.92□□□□□ -0.66
SCN9A-205ENST00000454569 IFFO1Q0D2I5 559 aa10.92□□□□□ -0.66
SCN9A-205ENST00000454569 KRT71Q3SY84 523 aa10.92□□□□□ -0.66
SCN9A-205ENST00000454569 KHDC1Q4VXA5 237 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms