RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 UNC50Q53HI1 259 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 RETSATQ6NUM9 610 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 Q6ZNB5 142 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 NET1Q7Z628 596 aaPredicted RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 ELMOD1Q8N336 334 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 SLC26A7Q8TE54 656 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 TRPC4APQ8TEL6 797 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 PYDC1Q8WXC3 89 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 MYLIPQ8WY64 445 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 USP13Q92995 863 aaPredicted RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 EID2BQ96D98 161 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 SLC46A2Q9BY10 475 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 ZBP1Q9H171 429 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 RETREG1Q9H6L5 497 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 SEMA4BQ9NPR2 832 aaPredicted RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.73□□□□□ -0.53
VTA1-203ENST00000452973 CXXC1Q9P0U4 656 aaPredicted RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 STOML1Q9UBI4 398 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 GIMAP2Q9UG22 337 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 CDH22Q9UJ99 828 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 RPL26L1Q9UNX3 145 aaKnown RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 MED16Q9Y2X0 877 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 SLC30A1Q9Y6M5 507 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 C1orf232A0A0U1RR37 186 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 RGSL1A5PLK6 1076 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 CTSAP10619 480 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 CES1P23141 567 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 ARL1P40616 181 aaPredicted RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 NME5P56597 212 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 ERVFC1P60507 584 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 RAD51Q06609 339 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 ZRSR2Q15696 482 aaKnown RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 MUM1Q2TAK8 710 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 INO80DQ53TQ3 878 aaPredicted RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 C1orf53Q5VUE5 145 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 RAB44Q7Z6P3 723 aaPredicted RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 ALG14Q96F25 216 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 MYO19Q96H55 970 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 ZNF570Q96NI8 536 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 BIRC8Q96P09 236 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 GCNAQ96QF7 691 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 KCNA7Q96RP8 456 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 NPAS2Q99743 824 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 ABCG8Q9H221 673 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 FBRSL1Q9HCM7 1045 aaKnown RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 ABCB8Q9NUT2 735 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 INTS10Q9NVR2 710 aaKnown RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 CCDC167Q9P0B6 97 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 STOML2Q9UJZ1 356 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 TRAV19A0A0A6YYK7 116 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 WISP3O95389 354 aaPredicted RBP11.72□□□□□ -0.53
VTA1-203ENST00000452973 CCR2P41597 374 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 PKNOX1P55347 436 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 HERVK_113P63132 956 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 SH3BP2P78314 561 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 BCL2L1Q07817 233 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 TRMT5Q32P41 509 aaKnown RBP11.72□□□□□ -0.53
VTA1-203ENST00000452973 SETMARQ53H47 684 aaPredicted RBP11.72□□□□□ -0.53
VTA1-203ENST00000452973 LRRC73Q5JTD7 316 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 ARMC3Q5W041 872 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 GK5Q6ZS86 529 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 AFAP1L2Q8N4X5 818 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 DCBLD1Q8N8Z6 715 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 DCAF4L2Q8NA75 395 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 GIMAP7Q8NHV1 300 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 EEF1AKMT1Q8WVE0 214 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 NRG4Q8WWG1 115 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 TCEAL4Q96EI5 215 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 ERVK-6Q9BXR3 956 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 SYTL2Q9HCH5 934 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 TRMT6Q9UJA5 497 aaKnown RBP11.72□□□□□ -0.53
VTA1-203ENST00000452973 ZNF711Q9Y462 761 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 COMMD10Q9Y6G5 202 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 STX16-NPEPL1H3BU86 382 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 LEFTY2O00292 366 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 LILRB3O75022 631 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 VPS26AO75436 327 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 CLDN7O95471 211 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 MTHFD2P13995 350 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 PKMP14618 531 aaKnown RBP11.72□□□□□ -0.53
VTA1-203ENST00000452973 TCN1P20061 433 aaPredicted RBP11.72□□□□□ -0.53
VTA1-203ENST00000452973 EEF1DP29692 281 aaKnown RBP11.72□□□□□ -0.53
VTA1-203ENST00000452973 ACTR3P61158 418 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 ZNF697Q5TEC3 545 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 FAM43BQ6ZT52 329 aaPredicted RBP11.72□□□□□ -0.53
VTA1-203ENST00000452973 DDIASQ8IXT1 998 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 CPNE9Q8IYJ1 553 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 TTC30BQ8N4P2 665 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 RSRC1Q96IZ7 334 aaKnown RBP11.72□□□□□ -0.53
VTA1-203ENST00000452973 ASAH2Q9NR71 780 aa11.72□□□□□ -0.53
VTA1-203ENST00000452973 ADH1AP07327 375 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 UGT1A6P19224 532 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 UGT1A1P22309 533 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 UGT1A4P22310 534 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 UGT1A3P35503 534 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 UGT1A5P35504 534 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 GJA8P48165 433 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 TTPAP49638 278 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 FOXA1P55317 472 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 ECT2LQ008S8 904 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms