RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PREBQ9HCU5 417 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 ITM2CQ9NQX7 267 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 CTNNAL1Q9UBT7 734 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 MAP2K7O14733 419 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 RASGRF2O14827 1237 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 ITGALP20701 1170 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 MAT2AP31153 395 aaKnown RBP14.56□□□□□ -0.08
TNF-208ENST00000449264 MSH2P43246 934 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 ABCG1P45844 678 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 DCDC1P59894 354 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 PPP2CBP62714 309 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 RPS21P63220 83 aaKnown RBP14.56□□□□□ -0.08
TNF-208ENST00000449264 PPP2CAP67775 309 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 CACNG1Q06432 222 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 SEMA3AQ14563 771 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 ZNF284Q2VY69 593 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 KIAA1161Q6NSJ0 714 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 MRNIPQ6NTE8 343 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 LRIG3Q6UXM1 1119 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 TAS2R42Q7RTR8 314 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 TECPR1Q7Z6L1 1165 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 STRA8Q7Z7C7 330 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 CNTN4Q8IWV2 1026 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 GABPB2Q8TAK5 448 aaPredicted RBP14.56□□□□□ -0.08
TNF-208ENST00000449264 RLN3Q8WXF3 142 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 AP2M1Q96CW1 435 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 ATXN7L3BQ96GX2 97 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 C19orf43Q9BQ61 176 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 ABCG8Q9H221 673 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 CENPHQ9H3R5 247 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 FBXO6Q9NRD1 293 aaPredicted RBP14.56□□□□□ -0.08
TNF-208ENST00000449264 RAD18Q9NS91 495 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 TBK1Q9UHD2 729 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 CRLS1Q9UJA2 301 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 ZFR2Q9UPR6 939 aaKnown RBP14.56□□□□□ -0.08
TNF-208ENST00000449264 EML5Q05BV3 1969 aa14.56□□□□□ -0.08
TNF-208ENST00000449264 RGSL1A5PLK6 1076 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 LRRC72A6NJI9 287 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 SEMA4FO95754 770 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 UGT1A6P19224 532 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 UGT1A1P22309 533 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 UGT1A4P22310 534 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 GCAP28676 217 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 PMLP29590 882 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 UGT1A3P35503 534 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 UGT1A5P35504 534 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 NFATC2Q13469 925 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 NAB1Q13506 487 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 TMED2Q15363 201 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 SNX20Q7Z614 316 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 HORMAD1Q86X24 394 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 CILP2Q8IUL8 1156 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 PIANPQ8IYJ0 282 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 NRSN1Q8IZ57 195 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 CAMKK1Q8N5S9 505 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 FAM160A2Q8N612 972 aaPredicted RBP14.55□□□□□ -0.08
TNF-208ENST00000449264 FRMD1Q8N878 549 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 SLC44A1Q8WWI5 657 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.55□□□□□ -0.08
TNF-208ENST00000449264 TOE1Q96GM8 510 aaKnown RBP14.55□□□□□ -0.08
TNF-208ENST00000449264 ACBD3Q9H3P7 528 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 SGK2Q9HBY8 427 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 PSMC3IPQ9P2W1 217 aaPredicted RBP14.55□□□□□ -0.08
TNF-208ENST00000449264 FBXO5Q9UKT4 447 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 K7ESF4 209 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 ZNF217O75362 1048 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 ITGA9Q13797 1035 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 ATP13A5Q4VNC0 1218 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 SETMARQ53H47 684 aaPredicted RBP14.55□□□□□ -0.08
TNF-208ENST00000449264 HENMT1Q5T8I9 393 aaKnown RBP14.55□□□□□ -0.08
TNF-208ENST00000449264 RAET1GQ6H3X3 334 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 TSSK4Q6SA08 328 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 PACS1Q6VY07 963 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 CYP2U1Q7Z449 544 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 SDCCAG8Q86SQ7 713 aaPredicted RBP14.55□□□□□ -0.08
TNF-208ENST00000449264 SLC26A11Q86WA9 606 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 C2CD4AQ8NCU7 369 aaPredicted RBP14.55□□□□□ -0.08
TNF-208ENST00000449264 OR2T34Q8NGX1 318 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 ZNF398Q8TD17 642 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 DCAKDQ8WVC6 231 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 CPNE1Q99829 537 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 ZSCAN5AQ9BUG6 496 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 CDH19Q9H159 772 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 NSMCE4AQ9NXX6 385 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 NFKBIL1Q9UBC1 381 aaPredicted RBP14.55□□□□□ -0.08
TNF-208ENST00000449264 SLC24A2Q9UI40 661 aa14.55□□□□□ -0.08
TNF-208ENST00000449264 GOLGA6L10A6NI86 522 aa14.54□□□□□ -0.08
TNF-208ENST00000449264 K7ESM1 405 aa14.54□□□□□ -0.08
TNF-208ENST00000449264 CDH16O75309 829 aa14.54□□□□□ -0.08
TNF-208ENST00000449264 PAK4O96013 591 aaPredicted RBP14.54□□□□□ -0.08
TNF-208ENST00000449264 IGLV3-19P01714 112 aa14.54□□□□□ -0.08
TNF-208ENST00000449264 PCCBP05166 539 aa14.54□□□□□ -0.08
TNF-208ENST00000449264 OGNP20774 298 aaKnown RBP14.54□□□□□ -0.08
TNF-208ENST00000449264 CD6P30203 668 aa14.54□□□□□ -0.08
TNF-208ENST00000449264 OXTRP30559 389 aa14.54□□□□□ -0.08
TNF-208ENST00000449264 CA5AP35218 305 aa14.54□□□□□ -0.08
TNF-208ENST00000449264 GP5P40197 560 aa14.54□□□□□ -0.08
TNF-208ENST00000449264 CLCN5P51795 746 aa14.54□□□□□ -0.08
TNF-208ENST00000449264 PTPN5P54829 565 aa14.54□□□□□ -0.08
TNF-208ENST00000449264 SGCGQ13326 291 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms