RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 FAM96AQ9H5X1 160 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 ASB8Q9H765 288 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 SGK2Q9HBY8 427 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 DLGAP2Q9P1A6 1054 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 PLXNA2O75051 1894 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 LRRC72A6NJI9 287 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 GAPDHSO14556 408 aaPredicted RBP19.44■□□□□ 0.7
SGCE-207ENST00000447873 UGT1A9O60656 530 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 RNGTTO60942 597 aaKnown RBP19.44■□□□□ 0.7
SGCE-207ENST00000447873 ZNF217O75362 1048 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 IGLV3-19P01714 112 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 GM2AP17900 193 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 GCAP28676 217 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 PMLP29590 882 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 ACSL1P33121 698 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 NFATC2Q13469 925 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 CHRNA6Q15825 494 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 ZNF284Q2VY69 593 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 TMEM31Q5JXX7 168 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 SEL1L3Q68CR1 1132 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 NEK5Q6P3R8 708 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 TAS2R42Q7RTR8 314 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 CILP2Q8IUL8 1156 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 C2CD4AQ8NCU7 369 aaPredicted RBP19.44■□□□□ 0.7
SGCE-207ENST00000447873 ZNF398Q8TD17 642 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.44■□□□□ 0.7
SGCE-207ENST00000447873 AP2M1Q96CW1 435 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 NUS1Q96E22 293 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 CPNE1Q99829 537 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 DHRS4Q9BTZ2 278 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 SPATA16Q9BXB7 569 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 UGT1A7Q9HAW7 530 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 UGT1A10Q9HAW8 530 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 UGT1A8Q9HAW9 530 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 MARCH4Q9P2E8 410 aaPredicted RBP19.44■□□□□ 0.7
SGCE-207ENST00000447873 NFKBIL1Q9UBC1 381 aaPredicted RBP19.44■□□□□ 0.7
SGCE-207ENST00000447873 FBXO5Q9UKT4 447 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 CYP8B1Q9UNU6 501 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 PSAT1Q9Y617 370 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 A0A1W2PQU0 124 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 GOLGA6L10A6NI86 522 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 AGPSO00116 658 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 CDH16O75309 829 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 PRSS56P0CW18 603 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 OGNP20774 298 aaKnown RBP19.43■□□□□ 0.7
SGCE-207ENST00000447873 OXTRP30559 389 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 CLCN5P51795 746 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 MPP1Q00013 466 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 ITGA9Q13797 1035 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 AARS2Q5JTZ9 985 aaKnown RBP19.43■□□□□ 0.7
SGCE-207ENST00000447873 HENMT1Q5T8I9 393 aaKnown RBP19.43■□□□□ 0.7
SGCE-207ENST00000447873 PSAPL1Q6NUJ1 521 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 MAMSTRQ6ZN01 415 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 KIAA0408Q6ZU52 694 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 LDB1Q86U70 411 aaPredicted RBP19.43■□□□□ 0.7
SGCE-207ENST00000447873 ZSCAN5AQ9BUG6 496 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 RIOK2Q9BVS4 552 aaKnown RBP19.43■□□□□ 0.7
SGCE-207ENST00000447873 TPSD1Q9BZJ3 242 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 ABCG8Q9H221 673 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 CENPHQ9H3R5 247 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 SPATA6Q9NWH7 488 aaPredicted RBP19.43■□□□□ 0.7
SGCE-207ENST00000447873 KCTD5Q9NXV2 234 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 PSMC3IPQ9P2W1 217 aaPredicted RBP19.43■□□□□ 0.7
SGCE-207ENST00000447873 TTC28Q96AY4 2481 aa19.43■□□□□ 0.7
SGCE-207ENST00000447873 GPR39O43194 453 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 FAM155BO75949 473 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 MYZAPP0CAP1 466 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 GP5P40197 560 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 PXNP49023 591 aaPredicted RBP19.42■□□□□ 0.7
SGCE-207ENST00000447873 CDKN1CP49918 316 aaPredicted RBP19.42■□□□□ 0.7
SGCE-207ENST00000447873 SGCGQ13326 291 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 SEMA3AQ14563 771 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 GPR33Q49SQ1 333 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 SETMARQ53H47 684 aaPredicted RBP19.42■□□□□ 0.7
SGCE-207ENST00000447873 ADGRD1Q6QNK2 874 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 PACS1Q6VY07 963 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 ZNF765Q7L2R6 523 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 HORMAD1Q86X24 394 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 TDRPQ86YL5 185 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 PIANPQ8IYJ0 282 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 TRAM1L1Q8N609 369 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 GOLGA6L1Q8N7Z2 621 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 OR2T34Q8NGX1 318 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 DTX3LQ8TDB6 740 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 DCAKDQ8WVC6 231 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 CTNNAL1Q9UBT7 734 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 TBK1Q9UHD2 729 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 CRLS1Q9UJA2 301 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 ZFR2Q9UPR6 939 aaKnown RBP19.42■□□□□ 0.7
SGCE-207ENST00000447873 DOCK9Q9BZ29 2069 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 A0A0C4DFX4 3053 aa19.42■□□□□ 0.7
SGCE-207ENST00000447873 PFDN6O15212 129 aa19.41■□□□□ 0.7
SGCE-207ENST00000447873 SEMA4FO95754 770 aa19.41■□□□□ 0.7
SGCE-207ENST00000447873 F7P08709 466 aaPredicted RBP19.41■□□□□ 0.7
SGCE-207ENST00000447873 UGT1A6P19224 532 aa19.41■□□□□ 0.7
SGCE-207ENST00000447873 UGT1A1P22309 533 aa19.41■□□□□ 0.7
SGCE-207ENST00000447873 UGT1A4P22310 534 aa19.41■□□□□ 0.7
SGCE-207ENST00000447873 UGT1A3P35503 534 aa19.41■□□□□ 0.7
SGCE-207ENST00000447873 UGT1A5P35504 534 aa19.41■□□□□ 0.7
SGCE-207ENST00000447873 TTPAP49638 278 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms