RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 TSNARE1Q96NA8 513 aa9.47□□□□□ -0.89
SMPD4P1-203ENST00000443839 OMDQ99983 421 aa9.47□□□□□ -0.89
SMPD4P1-203ENST00000443839 CCDC68Q9H2F9 335 aa9.47□□□□□ -0.89
SMPD4P1-203ENST00000443839 C8orf33Q9H7E9 229 aaPredicted RBP9.47□□□□□ -0.89
SMPD4P1-203ENST00000443839 IL26Q9NPH9 171 aa9.47□□□□□ -0.89
SMPD4P1-203ENST00000443839 PRSS16Q9NQE7 514 aa9.47□□□□□ -0.89
SMPD4P1-203ENST00000443839 DCDC2Q9UHG0 476 aa9.47□□□□□ -0.89
SMPD4P1-203ENST00000443839 GRID1Q9ULK0 1009 aa9.47□□□□□ -0.89
SMPD4P1-203ENST00000443839 CORO1CQ9ULV4 474 aaPredicted RBP9.47□□□□□ -0.89
SMPD4P1-203ENST00000443839 PLLPQ9Y342 182 aa9.47□□□□□ -0.89
SMPD4P1-203ENST00000443839 SCN8AQ9UQD0 1980 aa9.47□□□□□ -0.89
SMPD4P1-203ENST00000443839 GPR39O43194 453 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 CRABP2P29373 138 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 PSMD8P48556 350 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 METAP1P53582 386 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 CORO7P57737 925 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 GRSF1Q12849 480 aaKnown RBP eCLIP9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 NFATC2Q13469 925 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 ZNF460Q14592 562 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 SMAD2Q15796 467 aaKnown RBP9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 C2orf27AQ580R0 203 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 HECTD2Q5U5R9 776 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 ZDHHC20Q5W0Z9 365 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 SDE2Q6IQ49 451 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 PTCRAQ6ISU1 281 aaPredicted RBP9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 CACUL1Q86Y37 369 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 CEP97Q8IW35 865 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 C10orf67Q8IYJ2 551 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 CBARPQ8N350 705 aaPredicted RBP9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 CCDC63Q8NA47 563 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 LPGAT1Q92604 370 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 GUCD1Q96NT3 240 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 FAM129BQ96TA1 746 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 TTC1Q99614 292 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 ASB8Q9H765 288 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 SLC24A3Q9HC58 644 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 VWA7Q9Y334 891 aa9.46□□□□□ -0.89
SMPD4P1-203ENST00000443839 NEMP1O14524 444 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 RNASEH1O60930 286 aaKnown RBP9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 C1SP09871 688 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 ELFN1P0C7U0 828 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 SLC35E2BP0CK96 405 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 NEFHP12036 1026 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 DRD1P21728 446 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 GMPRP36959 345 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 PPARGP37231 505 aaPredicted RBP9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 MMP12P39900 470 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 KIR2DL1P43626 348 aaPredicted RBP9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 SPINT3P49223 89 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 PGGT1BP53609 377 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 SEC24CP53992 1094 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 PTPN5P54829 565 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 PFKPQ01813 784 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 ENPP2Q13822 863 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 ZKSCAN8Q15776 578 aaPredicted RBP9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 N4BP2L1Q5TBK1 243 aaPredicted RBP9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 FAM46CQ5VWP2 391 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 FAM45BPQ6NSW5 357 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 KYAT3Q6YP21 454 aaKnown RBP9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 CERS6Q6ZMG9 384 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 DPPA4Q7L190 304 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 SNX20Q7Z614 316 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 GPR26Q8NDV2 337 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 ARMC2Q8NEN0 867 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 FAM45AQ8TCE6 357 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 CKAP2Q8WWK9 683 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 EZH1Q92800 747 aaPredicted RBP9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 FAM107BQ9H098 131 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 EPN3Q9H201 632 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 RABEP2Q9H5N1 569 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 PKD2L2Q9NZM6 624 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 CRLS1Q9UJA2 301 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 ANKRD6Q9Y2G4 727 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 ACOT9Q9Y305 439 aa9.46□□□□□ -0.9
SMPD4P1-203ENST00000443839 WDR91A4D1P6 747 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 GMNCA6NCL1 334 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 GAPDHSO14556 408 aaPredicted RBP9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 NARSO43776 548 aaKnown RBP9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 EGFP01133 1207 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 GSTA1P08263 222 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 VIMP08670 466 aaKnown RBP9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 ADRB3P13945 408 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 NTSR1P30989 418 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 FMO4P31512 558 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 ETV4P43268 484 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 MAGEA9P43362 315 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 IRX4P78413 519 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 IRF9Q00978 393 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 ELP6Q0PNE2 266 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 STARD3Q14849 445 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 CHRNA6Q15825 494 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 INSCQ1MX18 579 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 LEXMQ3ZCV2 418 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 GPR33Q49SQ1 333 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 TMEM196Q5HYL7 178 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 GPR153Q6NV75 609 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 TBC1D1Q86TI0 1168 aaPredicted RBP9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 SERPINA9Q86WD7 417 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 ZNF398Q8TD17 642 aa9.45□□□□□ -0.9
SMPD4P1-203ENST00000443839 ARRDC3Q96B67 414 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms