RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 NRROSQ86YC3 692 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 NDUFAF2Q8N183 169 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 OXR1Q8N573 874 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 MAIP1Q8WWC4 291 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 SKA1Q96BD8 255 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 GPR63Q9BZJ6 419 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 FAM83DQ9H4H8 585 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 ARFGAP3Q9NP61 516 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 IL26Q9NPH9 171 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 CASS4Q9NQ75 786 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 RAB6BQ9NRW1 208 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 PKD2L2Q9NZM6 624 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 APOBEC3BQ9UH17 382 aaKnown RBP12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 SLC17A4Q9Y2C5 497 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 TMEM98Q9Y2Y6 226 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 PLEKHM1Q9Y4G2 1056 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 PIKFYVEQ9Y2I7 2098 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 MED19A0JLT2 244 aaPredicted RBP12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 PRSS38A1L453 326 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 CASC3O15234 703 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 DNAJC6O75061 913 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 ZNF189O75820 626 aaPredicted RBP12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 DKK1O94907 266 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 TOP3BO95985 862 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 PRSS56P0CW18 603 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 TCP1P17987 556 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 NFKBIAP25963 317 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 FDFT1P37268 417 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 GPR1P46091 355 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 SRP54P61011 504 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 PEX6Q13608 980 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 KCNJ11Q14654 390 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 TAF1AQ15573 450 aaPredicted RBP12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 PROX2Q3B8N5 592 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 ATP13A5Q4VNC0 1218 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 PPM1JQ5JR12 505 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 CERCAMQ5T4B2 595 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 XKR5Q6UX68 686 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 GLT6D1Q7Z4J2 308 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 SLCO6A1Q86UG4 719 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 AGGF1Q8N302 714 aaeCLIP12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 EID2Q8N6I1 236 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 OR56A4Q8NGH8 313 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 MAGOHBQ96A72 148 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 CAPZA3Q96KX2 299 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 ZNF778Q96MU6 729 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 DDX47Q9H0S4 455 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 TMEM168Q9H0V1 697 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 LRRC40Q9H9A6 602 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 PAK5Q9P286 719 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 KLQ9UEF7 1012 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 WASF3Q9UPY6 502 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 DGKBQ9Y6T7 804 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 NCOR2Q9Y618 2525 aa12.76□□□□□ -0.37
PDLIM2-212ENST00000443561 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 RGSL1A5PLK6 1076 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 GOLGA6CA6NDK9 693 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 GOLGA6BA6NDN3 693 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 PRR19A6NJB7 356 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 YKT6O15498 198 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 FFAR2O15552 330 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 SIGLEC6O43699 453 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 UGT1A9O60656 530 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 MTX2O75431 263 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 GOLGA6DP0CG33 693 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 UGT1A6P19224 532 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 UGT1A1P22309 533 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 UGT1A4P22310 534 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 UGT1A3P35503 534 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 UGT1A5P35504 534 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 GRK6P43250 576 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 MAGEA6P43360 314 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 ARRB1P49407 418 aaPredicted RBP12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 VPS41P49754 854 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 ARSDP51689 593 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 HNRNPKP61978 463 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 ETF1P62495 437 aaKnown RBP12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 PPARDQ03181 441 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 DNAJC3Q13217 504 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 PTK2BQ14289 1009 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 PRPSAP1Q14558 356 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 CHRNA6Q15825 494 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 N4BP2L1Q5TBK1 243 aaPredicted RBP12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 CCDC137Q6PK04 289 aaKnown RBP12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 DOK6Q6PKX4 331 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 SYT10Q6XYQ8 523 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 GLRX5Q86SX6 157 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 HID1Q8IV36 788 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 TRAM1L1Q8N609 369 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 PNPLA1Q8N8W4 532 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 OR4K2Q8NGD2 314 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 OR4C6Q8NH72 309 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 CCHCR1Q8TD31 782 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 NAT14Q8WUY8 206 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 CPT1BQ92523 772 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 DNAJC1Q96KC8 554 aaKnown RBP12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 TBATAQ96M53 351 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 PLEKHG4BQ96PX9 1271 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 FERMT1Q9BQL6 677 aa12.75□□□□□ -0.37
PDLIM2-212ENST00000443561 TRABDQ9H4I3 376 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms