RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 C1orf232A0A0U1RR37 186 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 INPP4BO15327 924 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 FZD6O60353 706 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 PRAMEF10O60809 474 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 HLA-DQB2P05538 268 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 SLC2A4P14672 509 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 IL4RP24394 825 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 CSTF2P33240 577 aaKnown RBP eCLIP11.71□□□□□ -0.53
TTC28-203ENST00000442232 MAN1A1P33908 653 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 ATP1A2P50993 1020 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 GPLD1P80108 840 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 TRA2AQ13595 282 aaKnown RBP eCLIP11.71□□□□□ -0.53
TTC28-203ENST00000442232 LY6DQ14210 128 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 NR1D2Q14995 579 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 PTPRRQ15256 657 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 SLC18A3Q16572 532 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 ATP13A4Q4VNC1 1196 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 TRIM74Q86UV6 250 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 NLRP8Q86W28 1048 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 C17orf82Q86X59 251 aaPredicted RBP11.71□□□□□ -0.53
TTC28-203ENST00000442232 RAVER1Q8IY67 606 aaKnown RBP11.71□□□□□ -0.53
TTC28-203ENST00000442232 CCDC13Q8IYE1 715 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 CBARPQ8N350 705 aaPredicted RBP11.71□□□□□ -0.53
TTC28-203ENST00000442232 PATE1Q8WXA2 126 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 TTC9Q92623 222 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 SCAMP4Q969E2 229 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 HDAC11Q96DB2 347 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 SGF29Q96ES7 293 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 MED8Q96G25 268 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 CCDC74BQ96LY2 380 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 NUDT22Q9BRQ3 303 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 RIOK2Q9BVS4 552 aaKnown RBP11.71□□□□□ -0.53
TTC28-203ENST00000442232 MAK16Q9BXY0 300 aaKnown RBP11.71□□□□□ -0.53
TTC28-203ENST00000442232 ADGRE3Q9BY15 652 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 B3GNT4Q9C0J1 378 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 ZNHIT2Q9UHR6 403 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 SSUH2Q9Y2M2 353 aa11.71□□□□□ -0.53
TTC28-203ENST00000442232 LRRD1A4D1F6 860 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 STMND1H3BQB6 276 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 DUX1O43812 170 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 AKR1B10O60218 316 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 CLDN7O95471 211 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 SOD1P00441 154 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 PLA2G2AP14555 144 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 ETV5P41161 510 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 CD86P42081 329 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 ARSEP51690 589 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 PTSQ03393 145 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 MESDQ14696 234 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 C16orf72Q14CZ0 275 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 PYCR3Q53H96 274 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 PCSK4Q6UW60 755 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 NAGSQ8N159 534 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 AGBL5Q8NDL9 886 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 RCBTB1Q8NDN9 531 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 OR4D9Q8NGE8 314 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 OR10G6Q8NH81 332 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 FAF2Q96CS3 445 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 SCARF2Q96GP6 870 aaPredicted RBP11.7□□□□□ -0.54
TTC28-203ENST00000442232 SLC38A3Q99624 504 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 MLPHQ9BV36 600 aaPredicted RBP11.7□□□□□ -0.54
TTC28-203ENST00000442232 XPO4Q9C0E2 1151 aaKnown RBP11.7□□□□□ -0.54
TTC28-203ENST00000442232 VPS18Q9P253 973 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 HEY1Q9Y5J3 304 aa11.7□□□□□ -0.54
TTC28-203ENST00000442232 ZNF462Q96JM2 2506 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 IGHV5-10-1A0A0J9YXX1 117 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 A0A0U1RQS6 177 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 RGSL1A5PLK6 1076 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 APOL1O14791 398 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 PPP1R12AO14974 1030 aaPredicted RBP11.69□□□□□ -0.54
TTC28-203ENST00000442232 EFSO43281 561 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 B4GAT1O43505 415 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 JCHAINP01591 159 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 FUCA1P04066 466 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 KRT1P04264 644 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 TMEM253P0C7T8 217 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 ZFXP17010 805 aaPredicted RBP11.69□□□□□ -0.54
TTC28-203ENST00000442232 KDELR1P24390 212 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 HNRNPH3P31942 346 aaKnown RBP11.69□□□□□ -0.54
TTC28-203ENST00000442232 TNNT3P45378 269 aaPredicted RBP11.69□□□□□ -0.54
TTC28-203ENST00000442232 LIMK2P53671 638 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 TAS2R40P59535 323 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 GBE1Q04446 702 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 AP1B1Q10567 949 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 TGIF1Q15583 401 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 ZNF569Q5MCW4 686 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 RFLNAQ6ZTI6 216 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 CHST15Q7LFX5 561 aaPredicted RBP11.69□□□□□ -0.54
TTC28-203ENST00000442232 TMPRSS9Q7Z410 1059 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 ZFAND4Q86XD8 727 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 FAM129CQ86XR2 697 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 PHYKPLQ8IUZ5 450 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 RHOT2Q8IXI1 618 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 AVL9Q8NBF6 648 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 OR8K1Q8NGG5 319 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 PTCD2Q8WV60 388 aaKnown RBP11.69□□□□□ -0.54
TTC28-203ENST00000442232 SH3KBP1Q96B97 665 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 COX14Q96I36 57 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 TAAR9Q96RI9 348 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 LYSMD1Q96S90 227 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms