RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 YWHAQP27348 245 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 FMO4P31512 558 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 DCTDP32321 178 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 PPM1AP35813 382 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 RPL3P39023 403 aaKnown RBP2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 GPR12P47775 334 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 CXCR3P49682 368 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 KRTAP10-12P60413 245 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 BTKQ06187 659 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 PICALMQ13492 652 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 DHX34Q14147 1143 aaKnown RBP2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 LRRC24Q50LG9 513 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 PMS2CLQ68D20 193 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 DGAT2L7PQ6IED9 249 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 ADAM5Q6NVV9 412 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 SRLQ86TD4 932 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 SUMF1Q8NBK3 374 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 LSM14AQ8ND56 463 aaKnown RBP2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 RFWD2Q8NHY2 731 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 SCAMP5Q8TAC9 235 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 TBC1D22AQ8WUA7 517 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 SORCS1Q8WY21 1168 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 CD101Q93033 1021 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 MASTLQ96GX5 879 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 PSMD1Q99460 953 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 TRIM4Q9C037 500 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 PABPC3Q9H361 631 aaKnown RBP2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 MVB12BQ9H7P6 319 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 PRDM8Q9NQV8 689 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 CHST12Q9NRB3 414 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 TMLHEQ9NVH6 421 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 TMEM51Q9NW97 253 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 NDUFAF4Q9P032 175 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 CHPF2Q9P2E5 772 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 CDC23Q9UJX2 597 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 FRMPD4Q14CM0 1322 aa2.96□□□□□ -1.93
HMGB1P18-201ENST00000438801 MGAQ8IWI9 3026 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 EPOPA6NHQ4 379 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 C17orf100A8MU93 164 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 NPHP1O15259 732 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 STRNO43815 780 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 KINO60870 393 aaKnown RBP2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 ACP5P13686 325 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 ARSAP15289 507 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 DGKAP23743 735 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 GLIPR1P48060 266 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 ST3GAL1Q11201 340 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 TNIP1Q15025 636 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 KLHL17Q6TDP4 642 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 UNQ6126/PRO20091Q6UXV3 157 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 SYNE3Q6ZMZ3 975 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 NEK10Q6ZWH5 1172 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 FAM186BQ8IYM0 893 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 MAML2Q8IZL2 1156 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 GALNT15Q8N3T1 639 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 OR4N2Q8NGD1 307 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 NEK9Q8TD19 979 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 SECTM1Q8WVN6 248 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 ARNTL2Q8WYA1 636 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 C3orf49Q96BT1 292 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 UHRF2Q96PU4 802 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 DDX23Q9BUQ8 820 aaKnown RBP2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 MFSD1Q9H3U5 465 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 EVA1AQ9H8M9 152 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 WDR6Q9NNW5 1121 aaKnown RBP2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 ARFGAP3Q9NP61 516 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 THAP1Q9NVV9 213 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 FBXO40Q9UH90 709 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 PCDHAC2Q9Y5I4 1007 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 MGAMO43451 1857 aa2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 COL5A1P20908 1838 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P18-201ENST00000438801 HYDINQ4G0P3 5121 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 ATMQ13315 3056 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 OR6C68A6NDL8 312 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 FAM90A20PA6NIJ5 464 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 FAM157AC9JC47 383 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 PPIP5K2O43314 1243 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 CBX6O95503 412 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 PAK4O96013 591 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 IGHV4-30-4P0DP06 118 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 MYOGP15173 224 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 GNALP38405 381 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 NEK3P51956 506 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 CRIP2P52943 208 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 PNLIPRP1P54315 467 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 PDCLQ13371 301 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 CALCRLQ16602 461 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 PFKFB4Q16877 469 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 PLEKHO1Q53GL0 409 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 SETMARQ53H47 684 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 DCAF6Q58WW2 860 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 RUNDC3AQ59EK9 446 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 SNRNP48Q6IEG0 339 aaKnown RBP2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 TUBA1AQ71U36 451 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 TAOK1Q7L7X3 1001 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 CCDC117Q8IWD4 279 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 CCDC105Q8IYK2 499 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms