RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 INTS10Q9NVR2 710 aaKnown RBP18.17■□□□□ 0.5
HMGN1-206ENST00000431390 PKD2L2Q9NZM6 624 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 SLC30A1Q9Y6M5 507 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 ATG2BQ96BY7 2078 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 DMXL1Q9Y485 3027 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 PSMD11O00231 422 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 POLR3GO15318 223 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-206ENST00000431390 ADAM23O75077 832 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 RFPL1O75677 317 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 S1PR4O95977 384 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 DCNP07585 359 aaKnown RBP18.16■□□□□ 0.5
HMGN1-206ENST00000431390 HOXB2P14652 356 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 KRT4P19013 534 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 METAP1P53582 386 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 SEMG2Q02383 582 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 PRKCQQ04759 706 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 SLC18A2Q05940 514 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 CST6Q15828 149 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 ZNF776Q68DI1 518 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-206ENST00000431390 SH2D5Q6ZV89 423 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 KIAA2013Q8IYS2 634 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 DCLK2Q8N568 766 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 TXNDC5Q8NBS9 432 aaKnown RBP18.16■□□□□ 0.5
HMGN1-206ENST00000431390 ACMSDQ8TDX5 336 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.16■□□□□ 0.5
HMGN1-206ENST00000431390 PLEKHG4BQ96PX9 1271 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 FBXO6Q9NRD1 293 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-206ENST00000431390 RAD18Q9NS91 495 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 NFKBIL1Q9UBC1 381 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-206ENST00000431390 CORO1CQ9ULV4 474 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-206ENST00000431390 SMG5Q9UPR3 1016 aaKnown RBP18.16■□□□□ 0.5
HMGN1-206ENST00000431390 VPS9D1Q9Y2B5 631 aa18.16■□□□□ 0.5
HMGN1-206ENST00000431390 GLYATL1P3A0A0U1RQE8 302 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 RGSL1A5PLK6 1076 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 GAPDHSO14556 408 aaPredicted RBP18.15■□□□□ 0.5
HMGN1-206ENST00000431390 AREL1O15033 823 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 PFDN6O15212 129 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 PRPF4O43172 522 aaKnown RBP eCLIP18.15■□□□□ 0.5
HMGN1-206ENST00000431390 SRP72O76094 671 aaKnown RBP18.15■□□□□ 0.5
HMGN1-206ENST00000431390 HAUS5O94927 633 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 CREB1P16220 341 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 C5AR1P21730 350 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 PMLP29590 882 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 CCNFP41002 786 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 MAGEA12P43365 314 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 SPINT3P49223 89 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 TTPAP49638 278 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 COPAP53621 1224 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 SLC18A1P54219 525 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 SEMA3AQ14563 771 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 RNF187Q5TA31 235 aaPredicted RBP18.15■□□□□ 0.5
HMGN1-206ENST00000431390 ZNF852Q6ZMS4 543 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 MICALCLQ6ZW33 695 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 C4orf33Q8N1A6 199 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 CDH19Q9H159 772 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 IL26Q9NPH9 171 aa18.15■□□□□ 0.5
HMGN1-206ENST00000431390 MTO1Q9Y2Z2 717 aaKnown RBP18.15■□□□□ 0.5
HMGN1-206ENST00000431390 EP300Q09472 2414 aaPredicted RBP18.15■□□□□ 0.5
HMGN1-206ENST00000431390 PLXNA2O75051 1894 aa18.14■□□□□ 0.5
HMGN1-206ENST00000431390 CACNA1IQ9P0X4 2223 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 A0A1W2PQF6 199 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 SPINT1O43278 529 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 PRAMEF1O95521 474 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 ALDOAP04075 364 aaKnown RBP18.14■□□□□ 0.49
HMGN1-206ENST00000431390 F7P08709 466 aaPredicted RBP18.14■□□□□ 0.49
HMGN1-206ENST00000431390 C7P10643 843 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 ITGALP20701 1170 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 SERPINB8P50452 374 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 DCDC1P59894 354 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 CCDC15Q0P6D6 951 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 GPR33Q49SQ1 333 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 ZRANB3Q5FWF4 1079 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 EOGTQ5NDL2 527 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 PSAPL1Q6NUJ1 521 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 KIAA1211LQ6NV74 962 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 CNSTQ6PJW8 725 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 LIPIQ6XZB0 460 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 CERS6Q6ZMG9 384 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 SNX20Q7Z614 316 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 DTX3LQ8TDB6 740 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 ATXN7L3BQ96GX2 97 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 SELENOSQ9BQE4 189 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 ARHGEF3Q9NR81 526 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 MKS1Q9NXB0 559 aa18.14■□□□□ 0.49
HMGN1-206ENST00000431390 TRBV5-4A0A0C4DH59 114 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 FAM95CA0A1B0GW59 222 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 MED19A0JLT2 244 aaPredicted RBP18.13■□□□□ 0.49
HMGN1-206ENST00000431390 TPP1O14773 563 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 TYROBPO43914 113 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 ELFN1P0C7U0 828 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 PYGBP11216 843 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 DRD3P35462 400 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 PPARGP37231 505 aaPredicted RBP18.13■□□□□ 0.49
HMGN1-206ENST00000431390 P2RY2P41231 377 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 ABCG1P45844 678 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 RPS14P62263 151 aaKnown RBP18.13■□□□□ 0.49
HMGN1-206ENST00000431390 NFATC2Q13469 925 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 TMEM52BQ4KMG9 183 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 ZNF789Q5FWF6 425 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 FAM151BQ6UXP7 276 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms