RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 FAM187AA6NFU0 413 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 FADS2P1A8MWK0 482 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 E7EVH7 732 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 DNALI1O14645 258 aaPredicted RBP12.36□□□□□ -0.43
USP40-205ENST00000430158 GDF9O60383 454 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 FUCA1P04066 466 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 PCCBP05166 539 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 TSHRP16473 764 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 LPOP22079 712 aaPredicted RBP12.36□□□□□ -0.43
USP40-205ENST00000430158 RXRGP48443 463 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 KIAA1024LP59773 190 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 EIF2B5Q13144 721 aaKnown RBP12.36□□□□□ -0.43
USP40-205ENST00000430158 CBLBQ13191 982 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 PPP1R7Q15435 360 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 HLA-BQ31612 363 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 DUPD1Q68J44 220 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 MICALCLQ6ZW33 695 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 KANSL1Q7Z3B3 1105 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 GLT6D1Q7Z4J2 308 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 OR2I1PQ8NGU4 316 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 FAM122AQ96E09 287 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 COX14Q96I36 57 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 PLEKHG4BQ96PX9 1271 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 ZDHHC5Q9C0B5 715 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 L2HGDHQ9H9P8 463 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 IL21RQ9HBE5 538 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 BPIFA1Q9NP55 256 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.36□□□□□ -0.43
USP40-205ENST00000430158 PKD2L2Q9NZM6 624 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 KLF15Q9UIH9 416 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 RIMKLBQ9ULI2 386 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 FNDC3AQ9Y2H6 1198 aaKnown RBP12.36□□□□□ -0.43
USP40-205ENST00000430158 OR1A2Q9Y585 309 aa12.36□□□□□ -0.43
USP40-205ENST00000430158 KNTC1P50748 2209 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 TMEM202A6NGA9 273 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 AGAP14A8MT82 685 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 ESPNB1AK53 854 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 H7C0S8 307 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 PPFIA2O75334 1257 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 AVILO75366 819 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 CRTAMO95727 393 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 MLNP12872 115 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 DEKP35659 375 aaKnown RBP12.35□□□□□ -0.43
USP40-205ENST00000430158 ADCY8P40145 1251 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 TNNT3P45378 269 aaPredicted RBP12.35□□□□□ -0.43
USP40-205ENST00000430158 RPL21P46778 160 aaKnown RBP12.35□□□□□ -0.43
USP40-205ENST00000430158 NPY2RP49146 381 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 CDK3Q00526 305 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 ACVR1Q04771 509 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 CKAP4Q07065 602 aaKnown RBP12.35□□□□□ -0.43
USP40-205ENST00000430158 PEX6Q13608 980 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 POU6F1Q14863 301 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 NFATC4Q14934 902 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 PRAMEF14Q5SWL7 426 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 HIBCHQ6NVY1 386 aaPredicted RBP12.35□□□□□ -0.43
USP40-205ENST00000430158 PPP1R21Q6ZMI0 780 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 DBX2Q6ZNG2 339 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 PTAR1Q7Z6K3 402 aaPredicted RBP12.35□□□□□ -0.43
USP40-205ENST00000430158 HEATR4Q86WZ0 1026 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 PPIL6Q8IXY8 311 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 MMGT1Q8N4V1 131 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 TRAM1L1Q8N609 369 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 GPR161Q8N6U8 529 aaKnown RBP12.35□□□□□ -0.43
USP40-205ENST00000430158 NOA1Q8NC60 698 aaKnown RBP12.35□□□□□ -0.43
USP40-205ENST00000430158 OR4K2Q8NGD2 314 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 OR13C4Q8NGS5 318 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 OR13J1Q8NGT2 312 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 LRRC45Q96CN5 670 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 SCARF2Q96GP6 870 aaPredicted RBP12.35□□□□□ -0.43
USP40-205ENST00000430158 ZNF778Q96MU6 729 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 ERP44Q9BS26 406 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 NUSAP1Q9BXS6 441 aaKnown RBP12.35□□□□□ -0.43
USP40-205ENST00000430158 FRMD8Q9BZ67 464 aaPredicted RBP12.35□□□□□ -0.43
USP40-205ENST00000430158 RAD18Q9NS91 495 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 DNAAF2Q9NVR5 837 aaKnown RBP12.35□□□□□ -0.43
USP40-205ENST00000430158 NLE1Q9NVX2 485 aaPredicted RBP12.35□□□□□ -0.43
USP40-205ENST00000430158 ASIC3Q9UHC3 531 aa12.35□□□□□ -0.43
USP40-205ENST00000430158 A0A1B0GTQ1 180 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 C2orf81A6NN90 581 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 STX7O15400 261 aaKnown RBP12.34□□□□□ -0.43
USP40-205ENST00000430158 FOXD2O60548 495 aaPredicted RBP12.34□□□□□ -0.43
USP40-205ENST00000430158 MAGEC1O60732 1142 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 SEC31AO94979 1220 aaKnown RBP12.34□□□□□ -0.43
USP40-205ENST00000430158 SLC4A1P02730 911 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 CEACAM5P06731 702 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 SYPP08247 313 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 MYCLP1P12525 358 aaPredicted RBP12.34□□□□□ -0.43
USP40-205ENST00000430158 ADRA1DP25100 572 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 LMAN1P49257 510 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 ARSDP51689 593 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 TERF1P54274 439 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 C21orf59P57076 290 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 CRADDP78560 199 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 PDE1CQ14123 709 aaPredicted RBP12.34□□□□□ -0.43
USP40-205ENST00000430158 TRADDQ15628 312 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 CHRNA6Q15825 494 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 CCDC38Q502W7 563 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 TSTD2Q5T7W7 516 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 IZUMO3Q5VZ72 239 aa12.34□□□□□ -0.43
USP40-205ENST00000430158 PDPK2PQ6A1A2 396 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms