RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 JCHAINP01591 159 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 CELA2BP08218 269 aaPredicted RBP12.69□□□□□ -0.38
SGCE-203ENST00000425444 PDHA1P08559 390 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 GM2AP17900 193 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 PDK1Q15118 436 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 TCEAL1Q15170 157 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 ALG1LQ6GMV1 187 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 PNCKQ6P2M8 343 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 GUSBP11Q6P575 273 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 CRTC1Q6UUV9 634 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 NPNTQ6UXI9 565 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 EFL1Q7Z2Z2 1120 aaKnown RBP12.69□□□□□ -0.38
SGCE-203ENST00000425444 HSD11B1LQ7Z5J1 315 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 VSIG1Q86XK7 387 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 GKN2Q86XP6 184 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 JAMLQ86YT9 394 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 ZSCAN1Q8NBB4 408 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 LPCAT1Q8NF37 534 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 PIH1D2Q8WWB5 315 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 LIN37Q96GY3 246 aaPredicted RBP12.69□□□□□ -0.38
SGCE-203ENST00000425444 MCCC1Q96RQ3 725 aaPredicted RBP12.69□□□□□ -0.38
SGCE-203ENST00000425444 TDRD1Q9BXT4 1180 aaKnown RBP12.69□□□□□ -0.38
SGCE-203ENST00000425444 CEP41Q9BYV8 373 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 CLPBQ9H078 707 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 GOLPH3Q9H4A6 298 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 SUDS3Q9H7L9 328 aaPredicted RBP12.69□□□□□ -0.38
SGCE-203ENST00000425444 PHPT1Q9NRX4 125 aaPredicted RBP12.69□□□□□ -0.38
SGCE-203ENST00000425444 SIRPGQ9P1W8 387 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 GULP1Q9UBP9 304 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 DNPEPQ9ULA0 475 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 CHKBQ9Y259 395 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 PCDHA13Q9Y5I0 950 aa12.69□□□□□ -0.38
SGCE-203ENST00000425444 ZFC3H1O60293 1989 aaKnown RBP12.69□□□□□ -0.38
SGCE-203ENST00000425444 CCDC187A0A096LP49 1063 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 A0A0J9YYE9 177 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 TMEM202A6NGA9 273 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 YY2O15391 372 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 FZD6O60353 706 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 NOBOXO60393 691 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 LCA5LO95447 670 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 TRBC1P01850 177 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 SLC5A2P31639 672 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 CD86P42081 329 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 CYP4F2P78329 520 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 IFI35P80217 286 aaPredicted RBP12.68□□□□□ -0.38
SGCE-203ENST00000425444 PPIDQ08752 370 aaKnown RBP12.68□□□□□ -0.38
SGCE-203ENST00000425444 ZBTB17Q13105 803 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 TFDP2Q14188 446 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 CLCA4Q14CN2 919 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 PTPRRQ15256 657 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 KAZNQ674X7 775 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 LRRC66Q68CR7 880 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 MFSD7Q6UXD7 560 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 NYAP1Q6ZVC0 841 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 HEATR4Q86WZ0 1026 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 CCDC50Q8IVM0 306 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 SLC35F3Q8IY50 421 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 PELI3Q8N2H9 469 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 ARL10Q8N8L6 244 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 ARRDC2Q8TBH0 407 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 OR1E3Q8WZA6 343 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 NAT6Q93015 286 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 PANX2Q96RD6 677 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 BOCQ9BWV1 1114 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 SYNDIG1Q9H7V2 258 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 PCDH9Q9HC56 1237 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 CYP4F12Q9HCS2 524 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 FGF22Q9HCT0 170 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 MRPL40Q9NQ50 206 aaKnown RBP12.68□□□□□ -0.38
SGCE-203ENST00000425444 TFR2Q9UP52 801 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 GPR34Q9UPC5 381 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 PPIL1Q9Y3C6 166 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 ALG6Q9Y672 507 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 DGKBQ9Y6T7 804 aa12.68□□□□□ -0.38
SGCE-203ENST00000425444 COL27A1Q8IZC6 1860 aaPredicted RBP12.68□□□□□ -0.38
SGCE-203ENST00000425444 A0A0A6YYK5 440 aaPredicted RBP12.67□□□□□ -0.38
SGCE-203ENST00000425444 A0A0U1RQS6 177 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 EME2A4GXA9 379 aaPredicted RBP12.67□□□□□ -0.38
SGCE-203ENST00000425444 SOWAHDA6NJG2 315 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 HOXC4P09017 264 aaPredicted RBP12.67□□□□□ -0.38
SGCE-203ENST00000425444 MYCLP1P12525 358 aaPredicted RBP12.67□□□□□ -0.38
SGCE-203ENST00000425444 ZNF30P17039 623 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 TRIM23P36406 574 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 GPR1P46091 355 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 HADHBP55084 474 aaKnown RBP12.67□□□□□ -0.38
SGCE-203ENST00000425444 NAP1L1P55209 391 aaKnown RBP12.67□□□□□ -0.38
SGCE-203ENST00000425444 NIPAL4Q0D2K0 466 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 LLGL1Q15334 1064 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 MANEAQ5SRI9 462 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 KCTD16Q68DU8 428 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 LVRNQ6Q4G3 990 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 SPOCD1Q6ZMY3 1216 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 Q6ZVL8 140 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 TAF8Q7Z7C8 310 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 DAAM2Q86T65 1068 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 TMTC1Q8IUR5 882 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 SDR16C5Q8N3Y7 309 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 AP2M1Q96CW1 435 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 AGAP3Q96P47 875 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 OLFM3Q96PB7 478 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms