RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 RCCD1A6NED2 376 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 B4DGG1 531 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 PPM1DO15297 605 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 PRAMEF10O60809 474 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 PGLSO95336 258 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 PDHA1P08559 390 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 KELP23276 732 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 AK4P27144 223 aaPredicted RBP12.93□□□□□ -0.34
VRK3-203ENST00000424804 TEAD1P28347 426 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 CD1CP29017 333 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 GARSP41250 739 aaKnown RBP12.93□□□□□ -0.34
VRK3-203ENST00000424804 POLD2P49005 469 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 OR1D5P58170 312 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 GALNT2Q10471 571 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 IFI16Q16666 785 aaKnown RBP12.93□□□□□ -0.34
VRK3-203ENST00000424804 NPNTQ6UXI9 565 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 HEATR4Q86WZ0 1026 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 ZFAND4Q86XD8 727 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 NAGSQ8N159 534 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 USP7Q93009 1102 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 NUS1Q96E22 293 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 STRADBQ9C0K7 418 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 DPEP2Q9H4A9 486 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 CARS2Q9HA77 564 aaKnown RBP12.93□□□□□ -0.34
VRK3-203ENST00000424804 TRNAU1APQ9NX07 287 aaKnown RBP12.93□□□□□ -0.34
VRK3-203ENST00000424804 SEPT10Q9P0V9 454 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 TAAR2Q9P1P5 351 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 PHTF1Q9UMS5 762 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 SUFUQ9UMX1 484 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 SLC17A4Q9Y2C5 497 aa12.93□□□□□ -0.34
VRK3-203ENST00000424804 PCYT1BQ9Y5K3 369 aaPredicted RBP12.93□□□□□ -0.34
VRK3-203ENST00000424804 A0A1W2PQ67 120 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 CAPN8A6NHC0 703 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 J3QKU1 62 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 AGRPO00253 132 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 ECEL1O95672 775 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 CPP00450 1065 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 PRLP01236 227 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 CCL4P13236 92 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 ITGB6P18564 788 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 MX2P20592 715 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 HSPA9P38646 679 aaKnown RBP12.92□□□□□ -0.34
VRK3-203ENST00000424804 MARCKSL1P49006 195 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 VAV2P52735 878 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 CDK3Q00526 305 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 CTBSQ01459 385 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 PTSQ03393 145 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 DPTQ07507 201 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 AP1B1Q10567 949 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 SQSTM1Q13501 440 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 TCEAL1Q15170 157 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 FAM182AQ5T1J6 154 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 TIGD7Q6NT04 549 aaPredicted RBP12.92□□□□□ -0.34
VRK3-203ENST00000424804 MFSD7Q6UXD7 560 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 B4GALNT4Q76KP1 1039 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 ZDHHC1Q8WTX9 485 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 PMEPA1Q969W9 287 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 FAF2Q96CS3 445 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 WDR24Q96S15 920 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 AGAP2Q99490 1192 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 NUDT22Q9BRQ3 303 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 ABCG8Q9H221 673 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 RDH14Q9HBH5 336 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 RBM22Q9NW64 420 aaKnown RBP eCLIP12.92□□□□□ -0.34
VRK3-203ENST00000424804 DTLQ9NZJ0 730 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 REXO2Q9Y3B8 237 aaKnown RBP12.92□□□□□ -0.34
VRK3-203ENST00000424804 DUSP10Q9Y6W6 482 aa12.92□□□□□ -0.34
VRK3-203ENST00000424804 A0A0A6YYK5 440 aaPredicted RBP12.91□□□□□ -0.34
VRK3-203ENST00000424804 IGHV5-10-1A0A0J9YXX1 117 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 MACROD2A1Z1Q3 448 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 CYSRT1A8MQ03 144 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 PYCARD-AS1I3L0S3 204 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 PSMD11O00231 422 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 MATN3O15232 486 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 PSTPIP1O43586 416 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 IVLP07476 585 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 LIPCP11150 499 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 CTPS1P17812 591 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 FECHP22830 423 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 ADCY8P40145 1251 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 HADHBP55084 474 aaKnown RBP12.91□□□□□ -0.34
VRK3-203ENST00000424804 SLC10A2Q12908 348 aaPredicted RBP12.91□□□□□ -0.34
VRK3-203ENST00000424804 RALGPS1Q5JS13 557 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 LRRC38Q5VT99 294 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 DENND2CQ68D51 928 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 ALG1LQ6GMV1 187 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 C11orf63Q6NUN7 778 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 USP53Q70EK8 1073 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 NLRP8Q86W28 1048 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 JAMLQ86YT9 394 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 CCDC13Q8IYE1 715 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 PLD5Q8N7P1 536 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 HTR3CQ8WXA8 447 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 MAML1Q92585 1016 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 TMEM159Q96B96 161 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 HAUS1Q96CS2 278 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 SEMA3CQ99985 751 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 CEP41Q9BYV8 373 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 B3GNT4Q9C0J1 378 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 POLR1EQ9GZS1 481 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms