RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CLDN19Q8N6F1 224 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.38□□□□□ -0.27
PRPF39-202ENST00000424478 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 PAFAH2Q99487 392 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 FAM8A1Q9UBU6 413 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 A0A087WUV0 522 aaPredicted RBP13.37□□□□□ -0.27
PRPF39-202ENST00000424478 MAGEB16A2A368 324 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 AP3B1O00203 1094 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 CD3EAPO15446 510 aaKnown RBP13.37□□□□□ -0.27
PRPF39-202ENST00000424478 GPR37L1O60883 481 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 CSTF1Q05048 431 aaKnown RBP13.37□□□□□ -0.27
PRPF39-202ENST00000424478 ZNF844Q08AG5 666 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 KCTD16Q68DU8 428 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 TECPR1Q7Z6L1 1165 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 MAML2Q8IZL2 1156 aaPredicted RBP13.37□□□□□ -0.27
PRPF39-202ENST00000424478 GDAP1Q8TB36 358 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 COQ10AQ96MF6 247 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 TTC25Q96NG3 672 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 KLF6Q99612 283 aaPredicted RBP13.37□□□□□ -0.27
PRPF39-202ENST00000424478 FAM83DQ9H4H8 585 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 TRABDQ9H4I3 376 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 USP36Q9P275 1121 aaKnown RBP13.37□□□□□ -0.27
PRPF39-202ENST00000424478 TSR3Q9UJK0 312 aaKnown RBP13.37□□□□□ -0.27
PRPF39-202ENST00000424478 PIKFYVEQ9Y2I7 2098 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 IGHV1OR15-9A0A0B4J2B8 117 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 SEMA4FO95754 770 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 FOXN2P32314 431 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 SPAM1P38567 509 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 WSCD2Q2TBF2 565 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 RAET1GQ6H3X3 334 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 KIAA0930Q6ICG6 404 aaPredicted RBP13.37□□□□□ -0.27
PRPF39-202ENST00000424478 STRA8Q7Z7C7 330 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 TMEFF1Q8IYR6 380 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 IQCKQ8N0W5 287 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 MREGQ8N565 214 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 PTCD2Q8WV60 388 aaKnown RBP13.37□□□□□ -0.27
PRPF39-202ENST00000424478 NUS1Q96E22 293 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 LGR4Q9BXB1 951 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 COL25A1Q9BXS0 654 aaPredicted RBP13.37□□□□□ -0.27
PRPF39-202ENST00000424478 ACSS3Q9H6R3 686 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 CAB39LQ9H9S4 337 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 CATSPERZQ9NTU4 200 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 PLXNB3Q9ULL4 1909 aa13.37□□□□□ -0.27
PRPF39-202ENST00000424478 UBA6A0AVT1 1052 aaPredicted RBP13.36□□□□□ -0.27
PRPF39-202ENST00000424478 IQCF5A8MTL0 148 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 AGPSO00116 658 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 TM7SF2O76062 418 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 ALDH1A2O94788 518 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 MGAT5Q09328 741 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 E2F5Q15329 346 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 DOK6Q6PKX4 331 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 DTD2Q96FN9 168 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 NAT9Q9BTE0 207 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 C11orf16Q9NQ32 467 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 PKD2L2Q9NZM6 624 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 SLC30A1Q9Y6M5 507 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 A0A1W2PQ67 120 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 FAM159BA6NKW6 160 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 SOD1P00441 154 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 AHSGP02765 367 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 ITGB6P18564 788 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 PHBP35232 272 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 ACVR1Q04771 509 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 TMED2Q15363 201 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 TMEM52BQ4KMG9 183 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 MROH9Q5TGP6 573 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 CBARPQ8N350 705 aaPredicted RBP13.36□□□□□ -0.27
PRPF39-202ENST00000424478 ZNF398Q8TD17 642 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 HCAR2Q8TDS4 363 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 UNKQ9C0B0 810 aaKnown RBP13.36□□□□□ -0.27
PRPF39-202ENST00000424478 MRM3Q9HC36 420 aaKnown RBP13.36□□□□□ -0.27
PRPF39-202ENST00000424478 PRKAB1Q9Y478 270 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 POM121BA6NF01 834 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 NFATC2Q13469 925 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 PDE1CQ14123 709 aaPredicted RBP13.36□□□□□ -0.27
PRPF39-202ENST00000424478 ZNF460Q14592 562 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 ZNF284Q2VY69 593 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 MAP7D1Q3KQU3 841 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 KRT71Q3SY84 523 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 FASTKD1Q53R41 847 aaKnown RBP13.36□□□□□ -0.27
PRPF39-202ENST00000424478 RBM20Q5T481 1227 aaKnown RBP13.36□□□□□ -0.27
PRPF39-202ENST00000424478 SERPINA9Q86WD7 417 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 BIRC7Q96CA5 298 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 SLC17A9Q9BYT1 436 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 PHACTR1Q9C0D0 580 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 FBXO5Q9UKT4 447 aa13.36□□□□□ -0.27
PRPF39-202ENST00000424478 SPAG17Q6Q759 2223 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 GOLGA8RI6L899 631 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 AXIN1O15169 862 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 DNAJC6O75061 913 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 PAPSS2O95340 614 aaPredicted RBP13.35□□□□□ -0.27
PRPF39-202ENST00000424478 ZNF30P17039 623 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 PAMP19021 973 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 STX2P32856 288 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 INPP5AQ14642 412 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 IRF4Q15306 451 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 PDPK2PQ6A1A2 396 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 MARK2Q7KZI7 788 aaKnown RBP13.35□□□□□ -0.27
PRPF39-202ENST00000424478 HDXQ7Z353 690 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms