RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 THP07101 528 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 INHBBP09529 407 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 OCM2P0CE71 109 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 OCMP0CE72 109 aaPredicted RBP14.31□□□□□ -0.12
MSH5-206ENST00000423982 PORP16435 677 aaPredicted RBP14.31□□□□□ -0.12
MSH5-206ENST00000423982 NR4A1P22736 598 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 ELK4P28324 431 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 DSC3Q14574 896 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 ZIK1Q3SY52 487 aaPredicted RBP14.31□□□□□ -0.12
MSH5-206ENST00000423982 LDLRAP1Q5SW96 308 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 NEPROQ6NW34 567 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 C16orf87Q6PH81 154 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 RYBPQ8N488 228 aaPredicted RBP14.31□□□□□ -0.12
MSH5-206ENST00000423982 PPHLN1Q8NEY8 458 aaKnown RBP14.31□□□□□ -0.12
MSH5-206ENST00000423982 GPATCH1Q9BRR8 931 aaKnown RBP14.31□□□□□ -0.12
MSH5-206ENST00000423982 NCAM2O15394 837 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 HUS1O60921 280 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 ADAM23O75077 832 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 COL6A1P12109 1028 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 FASP25445 335 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 DAOAP59103 153 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 SH3BP2P78314 561 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 ATP6AP1Q15904 470 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 CYP51A1Q16850 503 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 ZNF829Q3KNS6 432 aaPredicted RBP14.3□□□□□ -0.12
MSH5-206ENST00000423982 FUT11Q495W5 492 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 CYBRD1Q53TN4 286 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 INTS11Q5TA45 600 aaKnown RBP14.3□□□□□ -0.12
MSH5-206ENST00000423982 SLC15A4Q8N697 577 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 OR52K2Q8NGK3 314 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 ADAMTS16Q8TE57 1224 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 TRPC4APQ8TEL6 797 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 NSUN5Q96P11 429 aaKnown RBP14.3□□□□□ -0.12
MSH5-206ENST00000423982 WDCPQ9H6R7 721 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 LTB4R2Q9NPC1 389 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.3□□□□□ -0.12
MSH5-206ENST00000423982 BTRCQ9Y297 605 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 DNAJC15Q9Y5T4 150 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 TTC24A2A3L6 582 aaPredicted RBP14.3□□□□□ -0.12
MSH5-206ENST00000423982 OR51F1A6NGY5 319 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 H3BMM5 538 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 SLC6A2P23975 617 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 PSMA4P25789 261 aaKnown RBP14.3□□□□□ -0.12
MSH5-206ENST00000423982 DCKP27707 260 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 LILRA4P59901 499 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 GEN1Q17RS7 908 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 ANKRD33Q7Z3H0 272 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 DDIASQ8IXT1 998 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 C3orf58Q8NDZ4 430 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 TNIP2Q8NFZ5 429 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 VPS33AQ96AX1 596 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 TNIP3Q96KP6 325 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 SEPHS2Q99611 448 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 EML4Q9HC35 981 aaKnown RBP14.3□□□□□ -0.12
MSH5-206ENST00000423982 TBC1D13Q9NVG8 400 aa14.3□□□□□ -0.12
MSH5-206ENST00000423982 TUBA8Q9NY65 449 aaPredicted RBP14.3□□□□□ -0.12
MSH5-206ENST00000423982 A0A087X1B8 175 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 TRIM64A6NGJ6 449 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 SERPINB7O75635 380 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 IL10P22301 178 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 PBX3P40426 434 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 TAF6P49848 677 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 CDKN2DP55273 166 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 STX1BP61266 288 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 ECT2LQ008S8 904 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 PSMD5Q16401 504 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 DCLRE1AQ6PJP8 1040 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 SLC24A5Q71RS6 500 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 LINC00523Q86TU6 105 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 RNF168Q8IYW5 571 aaPredicted RBP14.29□□□□□ -0.12
MSH5-206ENST00000423982 BORCS5Q969J3 196 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 NTAN1Q96AB6 310 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 ACDQ96AP0 544 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 TMEM74Q96NL1 305 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 PPP1R10Q96QC0 940 aaKnown RBP14.29□□□□□ -0.12
MSH5-206ENST00000423982 SMOQ99835 787 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 CRTAC1Q9NQ79 661 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 TREX1Q9NSU2 369 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 SLAMF8Q9P0V8 285 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 MAGED1Q9Y5V3 778 aaPredicted RBP14.29□□□□□ -0.12
MSH5-206ENST00000423982 PIP5K1BO14986 540 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 B4GALT3O60512 393 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 SLC4A1P02730 911 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 HLA-DQB2P05538 268 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 LTA4HP09960 611 aaKnown RBP14.29□□□□□ -0.12
MSH5-206ENST00000423982 ACRP10323 421 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 SCAPQ12770 1279 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 UNC50Q53HI1 259 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 OTUD3Q5T2D3 398 aaPredicted RBP14.29□□□□□ -0.12
MSH5-206ENST00000423982 DDHD1Q8NEL9 900 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 ZMIZ2Q8NF64 920 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 SEPT8Q92599 483 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 RNF34Q969K3 372 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 PTERQ96BW5 349 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 CENPNQ96H22 339 aaPredicted RBP14.29□□□□□ -0.12
MSH5-206ENST00000423982 TEX37Q96LM6 180 aa14.29□□□□□ -0.12
MSH5-206ENST00000423982 TSPYL2Q9H2G4 693 aaPredicted RBP14.29□□□□□ -0.12
MSH5-206ENST00000423982 TRNAU1APQ9NX07 287 aaKnown RBP14.29□□□□□ -0.12
MSH5-206ENST00000423982 EVLQ9UI08 416 aaPredicted RBP14.29□□□□□ -0.12
MSH5-206ENST00000423982 PAIP2BQ9ULR5 123 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms