RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 EGFL8Q99944 293 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 TRIM62Q9BVG3 475 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 SDK1Q7Z5N4 2213 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 PDCD11Q14690 1871 aaKnown RBP13.3□□□□□ -0.28
MCF2L-213ENST00000421756 SZT2Q5T011 3432 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 UPK3BL1B0FP48 263 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 UPK3BL2E5RIL1 263 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 AXIN1O15169 862 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 INSIG1O15503 277 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 NBNO60934 754 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 LEPRP48357 1165 aaKnown RBP13.3□□□□□ -0.28
MCF2L-213ENST00000421756 TMEM259Q4ZIN3 620 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 OTUD3Q5T2D3 398 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-213ENST00000421756 MIER2Q8N344 545 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 FBXO22Q8NEZ5 403 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 OR52B6Q8NGF0 335 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 LINGO1Q96FE5 620 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 CNDP1Q96KN2 507 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 AGO1Q9UL18 857 aaKnown RBP13.3□□□□□ -0.28
MCF2L-213ENST00000421756 LZTS1Q9Y250 596 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 PCDHGA7Q9Y5G6 932 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 RAI2Q9Y5P3 530 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 AP3B1O00203 1094 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 CLGNO14967 610 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 AZIN1O14977 448 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 OR4F21O95013 312 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 MBL2P11226 248 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-213ENST00000421756 TSTA3Q13630 321 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-213ENST00000421756 TXNDC8Q6A555 127 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 FRA10AC1Q70Z53 315 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 DET1Q7L5Y6 550 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 ZNF483Q8TF39 744 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-213ENST00000421756 JADE3Q92613 823 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 ISL2Q96A47 359 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 HGH1Q9BTY7 390 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 ZFP14Q9HCL3 533 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 POLR3BQ9NW08 1133 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-213ENST00000421756 TMEM248Q9NWD8 314 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 EYSQ5T1H1 3165 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 SLC38A8A6NNN8 435 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 H2AFYO75367 372 aaKnown RBP13.29□□□□□ -0.28
MCF2L-213ENST00000421756 PFKPQ01813 784 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 STX5Q13190 355 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 ACAP2Q15057 778 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 TRIP4Q15650 581 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-213ENST00000421756 TCTN1Q2MV58 587 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 AAGABQ6PD74 315 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 CHST15Q7LFX5 561 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-213ENST00000421756 FNDC5Q8NAU1 212 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 RDH11Q8TC12 318 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 CYGBQ8WWM9 190 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 DOCK6Q96HP0 2047 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 COCHO43405 550 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 KIF1CO43896 1103 aaKnown RBP13.29□□□□□ -0.28
MCF2L-213ENST00000421756 TBL1XO60907 577 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 ECI2O75521 394 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 CD1DP15813 335 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 ZNF37AP17032 561 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-213ENST00000421756 TYMPP19971 482 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 SREBF2Q12772 1141 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 ZIK1Q3SY52 487 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-213ENST00000421756 MBOAT1Q6ZNC8 495 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 RBM44Q6ZP01 1051 aaKnown RBP13.29□□□□□ -0.28
MCF2L-213ENST00000421756 LRRC8DQ7L1W4 858 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 OFCC1Q8IZS5 231 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 BBS5Q8N3I7 341 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 GABPB2Q8TAK5 448 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-213ENST00000421756 PPM1MQ96MI6 270 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 TMEM79Q9BSE2 394 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 BOCQ9BWV1 1114 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 PRDM16Q9HAZ2 1276 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 LATS2Q9NRM7 1088 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 ZSWIM8A7E2V4 1837 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 RPP40O75818 363 aaKnown RBP13.29□□□□□ -0.28
MCF2L-213ENST00000421756 OAZ2O95190 189 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 DGKQP52824 942 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 SMAD3P84022 425 aaKnown RBP13.29□□□□□ -0.28
MCF2L-213ENST00000421756 CLCQ05315 142 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 NFYCQ13952 458 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 CNPY1Q3B7I2 92 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.29□□□□□ -0.28
MCF2L-213ENST00000421756 ARL14EPQ8N8R7 260 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-213ENST00000421756 MCMBPQ9BTE3 642 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 TAS2R13Q9NYV9 303 aa13.29□□□□□ -0.28
MCF2L-213ENST00000421756 A0A1W2PQ45 241 aaPredicted RBP13.28□□□□□ -0.28
MCF2L-213ENST00000421756 A0A1W2PQY0 241 aa13.28□□□□□ -0.28
MCF2L-213ENST00000421756 PLOD2O00469 737 aa13.28□□□□□ -0.28
MCF2L-213ENST00000421756 CLPTM1O96005 669 aa13.28□□□□□ -0.28
MCF2L-213ENST00000421756 CAPN3P20807 821 aa13.28□□□□□ -0.28
MCF2L-213ENST00000421756 IMPDH1P20839 514 aa13.28□□□□□ -0.28
MCF2L-213ENST00000421756 SLC11A2P49281 568 aa13.28□□□□□ -0.28
MCF2L-213ENST00000421756 CHN2P52757 468 aa13.28□□□□□ -0.28
MCF2L-213ENST00000421756 RHOAP61586 193 aa13.28□□□□□ -0.28
MCF2L-213ENST00000421756 UFM1P61960 85 aa13.28□□□□□ -0.28
MCF2L-213ENST00000421756 LIN52Q52LA3 116 aa13.28□□□□□ -0.28
MCF2L-213ENST00000421756 ZBTB49Q6ZSB9 765 aa13.28□□□□□ -0.28
MCF2L-213ENST00000421756 FUNDC1Q8IVP5 155 aa13.28□□□□□ -0.28
MCF2L-213ENST00000421756 GFM2Q969S9 779 aaKnown RBP13.28□□□□□ -0.28
MCF2L-213ENST00000421756 TBCDQ9BTW9 1192 aa13.28□□□□□ -0.28
MCF2L-213ENST00000421756 TTPALQ9BTX7 342 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms