RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 CDKN2AIPNLQ96HQ2 116 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 EBNA1BP2Q99848 306 aaKnown RBP17.45■□□□□ 0.38
LINC00271-201ENST00000421378 TRIM56Q9BRZ2 755 aaKnown RBP17.45■□□□□ 0.38
LINC00271-201ENST00000421378 SEMA4AQ9H3S1 761 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 ANKZF1Q9H8Y5 726 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 TMEM74BQ9NUR3 256 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.45■□□□□ 0.38
LINC00271-201ENST00000421378 CHMP2BQ9UQN3 213 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 TEX264Q9Y6I9 313 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 RPS6KL1Q9Y6S9 549 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 V9GYY5 206 aaPredicted RBP17.45■□□□□ 0.38
LINC00271-201ENST00000421378 FRYLO94915 3013 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 EIF3HO15372 352 aaKnown RBP eCLIP17.45■□□□□ 0.38
LINC00271-201ENST00000421378 USP1O94782 785 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 SOD1P00441 154 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 POLBP06746 335 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 PAMP19021 973 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 PSMA3P25788 255 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 CD38P28907 300 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 ARSDP51689 593 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 AFF3P51826 1226 aaKnown RBP17.45■□□□□ 0.38
LINC00271-201ENST00000421378 PRAMEP78395 509 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 CBLBQ13191 982 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 ITGA9Q13797 1035 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 FASTKD3Q14CZ7 662 aaKnown RBP17.45■□□□□ 0.38
LINC00271-201ENST00000421378 PEAR1Q5VY43 1037 aaPredicted RBP17.45■□□□□ 0.38
LINC00271-201ENST00000421378 PDPK2PQ6A1A2 396 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 LAIR1Q6GTX8 287 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 CES3Q6UWW8 571 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 KYAT3Q6YP21 454 aaKnown RBP17.45■□□□□ 0.38
LINC00271-201ENST00000421378 KDM7AQ6ZMT4 941 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 PTAR1Q7Z6K3 402 aaPredicted RBP17.45■□□□□ 0.38
LINC00271-201ENST00000421378 ABI3BPQ7Z7G0 1075 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 TMEM135Q86UB9 458 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 CCNJLQ8IV13 435 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 FAM174AQ8TBP5 190 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 DTX3LQ8TDB6 740 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 RUBCNQ92622 972 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 ZNF669Q96BR6 464 aaPredicted RBP17.45■□□□□ 0.38
LINC00271-201ENST00000421378 BMFQ96LC9 184 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 TBATAQ96M53 351 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 AGAP2Q99490 1192 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 WDR83Q9BRX9 315 aaKnown RBP17.45■□□□□ 0.38
LINC00271-201ENST00000421378 WDR26Q9H7D7 661 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 SUDS3Q9H7L9 328 aaPredicted RBP17.45■□□□□ 0.38
LINC00271-201ENST00000421378 NFU1Q9UMS0 254 aa17.45■□□□□ 0.38
LINC00271-201ENST00000421378 A0A1B0GTW7 788 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 FADS2P1A8MWK0 482 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 PRR5-ARHGAP8B1AHC4 643 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 GAPDHSO14556 408 aaPredicted RBP17.44■□□□□ 0.38
LINC00271-201ENST00000421378 SRP72O76094 671 aaKnown RBP17.44■□□□□ 0.38
LINC00271-201ENST00000421378 EPN2O95208 641 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 TTC4O95801 387 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 MC4RP32245 332 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 XIAPP98170 497 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 PEX6Q13608 980 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 CHRNA6Q15825 494 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 HEATR4Q86WZ0 1026 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 IGDCC3Q8IVU1 814 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 MFSD2AQ8NA29 543 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 SUMF1Q8NBK3 374 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 FBXO36Q8NEA4 188 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 HDAC10Q969S8 669 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 TSPYL1Q9H0U9 437 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 SAYSD1Q9NPB0 183 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 ZC3H7BQ9UGR2 993 aaKnown RBP17.44■□□□□ 0.38
LINC00271-201ENST00000421378 OR1A2Q9Y585 309 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 PCDHGA5Q9Y5G8 931 aa17.44■□□□□ 0.38
LINC00271-201ENST00000421378 TOR1BO14657 336 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 GPR39O43194 453 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 TEAD1P28347 426 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 TRIM23P36406 574 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 RABIFP47224 123 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 PFN3P60673 137 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 OVGP1Q12889 678 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 NFATC2Q13469 925 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 ERCC6LQ2NKX8 1250 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 ANKRD20A4Q4UJ75 823 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 ATP13A5Q4VNC0 1218 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 AFTPHQ6ULP2 937 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 LAYNQ6UX15 382 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 ADAMTSL4Q6UY14 1074 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 CEP128Q6ZU80 1094 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 RABEPKQ7Z6M1 372 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 IQCHQ86VS3 1027 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 ANKMY2Q8IV38 441 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 GPR161Q8N6U8 529 aaKnown RBP17.43■□□□□ 0.38
LINC00271-201ENST00000421378 OR6P1Q8NGX9 317 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 SLC30A1Q9Y6M5 507 aa17.43■□□□□ 0.38
LINC00271-201ENST00000421378 CCDC162PA2VCL2 907 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 THEGLP0DJG4 465 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 ITGALP20701 1170 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 MPLP40238 635 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 YPEL5P62699 121 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 CDK3Q00526 305 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 CRYMQ14894 314 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 TEAD4Q15561 434 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 KIAA0930Q6ICG6 404 aaPredicted RBP17.42■□□□□ 0.38
LINC00271-201ENST00000421378 Q6ZSR6 202 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 SNX20Q7Z614 316 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms