RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 SLC30A1Q9Y6M5 507 aa16.91■□□□□ 0.3
CALD1-204ENST00000417172 ERICH4A6NGS2 130 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 K7EQS6 105 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 NDUFS3O75489 264 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 FAM107AO95990 144 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 IL1BP01584 269 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 SLC12A2P55011 1212 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 POLR2LP62875 67 aaKnown RBP16.9■□□□□ 0.3
CALD1-204ENST00000417172 TAF1BQ53T94 588 aaPredicted RBP16.9■□□□□ 0.3
CALD1-204ENST00000417172 HSD11B1LQ7Z5J1 315 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 MMAAQ8IVH4 418 aaKnown RBP16.9■□□□□ 0.3
CALD1-204ENST00000417172 KDM1BQ8NB78 822 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 ANKRD49Q8WVL7 239 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 OR8D1Q8WZ84 308 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 ZNF75CPQ92670 426 aaPredicted RBP16.9■□□□□ 0.3
CALD1-204ENST00000417172 NXNL1Q96CM4 212 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 P2RY13Q9BPV8 354 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 BOCQ9BWV1 1114 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 KCNK12Q9HB15 430 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 PRSS16Q9NQE7 514 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 INTS10Q9NVR2 710 aaKnown RBP16.9■□□□□ 0.3
CALD1-204ENST00000417172 PPM1HQ9ULR3 514 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 MED16Q9Y2X0 877 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 VWA7Q9Y334 891 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 GLYATL1P3A0A0U1RQE8 302 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 SPINT1O43278 529 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 CTHP32929 405 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 TIE1P35590 1138 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 SPAM1P38567 509 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 CACNG1Q06432 222 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 RALGDSQ12967 914 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 NFATC2Q13469 925 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 ELAVL3Q14576 367 aaKnown RBP16.9■□□□□ 0.3
CALD1-204ENST00000417172 CHPFQ8IZ52 775 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 ZNF513Q8N8E2 541 aaPredicted RBP16.9■□□□□ 0.3
CALD1-204ENST00000417172 CABS1Q96KC9 395 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 BIRC8Q96P09 236 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 ASB8Q9H765 288 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 CPSF2Q9P2I0 782 aaKnown RBP16.9■□□□□ 0.3
CALD1-204ENST00000417172 GALPQ9UBC7 116 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 ACOT9Q9Y305 439 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 STON1Q9Y6Q2 735 aa16.9■□□□□ 0.3
CALD1-204ENST00000417172 SPECC1L-ADORA2AF8WAN1 911 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 TK2O00142 265 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 PRNPP04156 253 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 COL6A3P12111 3177 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 KCNA4P22459 653 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 VIPR1P32241 457 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 SMAD4Q13485 552 aaKnown RBP16.89■□□□□ 0.29
CALD1-204ENST00000417172 PCLAFQ15004 111 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 DBN1Q16643 649 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 CTSL3PQ5NE16 218 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 KYAT3Q6YP21 454 aaKnown RBP16.89■□□□□ 0.29
CALD1-204ENST00000417172 ZCCHC23Q6ZST2 131 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 CPLX4Q7Z7G2 160 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 SERPINA9Q86WD7 417 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 SLC44A3Q8N4M1 653 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 LRRC8CQ8TDW0 803 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 LRIG1Q96JA1 1093 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 CDX2Q99626 313 aaPredicted RBP16.89■□□□□ 0.29
CALD1-204ENST00000417172 AARSD1Q9BTE6 412 aaKnown RBP16.89■□□□□ 0.29
CALD1-204ENST00000417172 DKK3Q9UBP4 350 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 RUVBL2Q9Y230 463 aaKnown RBP16.89■□□□□ 0.29
CALD1-204ENST00000417172 FAM50BQ9Y247 325 aa16.89■□□□□ 0.29
CALD1-204ENST00000417172 A0A1W2PQ67 120 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 SRRM3A6NNA2 597 aaPredicted RBP16.88■□□□□ 0.29
CALD1-204ENST00000417172 IQCF5A8MTL0 148 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 NARSO43776 548 aaKnown RBP16.88■□□□□ 0.29
CALD1-204ENST00000417172 BPGMP07738 259 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 FDXRP22570 491 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 XPAP23025 273 aaPredicted RBP16.88■□□□□ 0.29
CALD1-204ENST00000417172 CRABP2P29373 138 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 MMP12P39900 470 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 KIR2DL1P43626 348 aaPredicted RBP16.88■□□□□ 0.29
CALD1-204ENST00000417172 PSMD8P48556 350 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 SPINT3P49223 89 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 TTPAP49638 278 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 ARHGEF7Q14155 803 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 CSHL1Q14406 222 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 PON2Q15165 354 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 INSCQ1MX18 579 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 SETMARQ53H47 684 aaPredicted RBP16.88■□□□□ 0.29
CALD1-204ENST00000417172 FAM45BPQ6NSW5 357 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 CGB2Q6NT52 195 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 FAM45AQ8TCE6 357 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 THOC1Q96FV9 657 aaKnown RBP16.88■□□□□ 0.29
CALD1-204ENST00000417172 GPR78Q96P69 363 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 WRAP53Q9BUR4 548 aaKnown RBP16.88■□□□□ 0.29
CALD1-204ENST00000417172 ZNF395Q9H8N7 513 aaPredicted RBP16.88■□□□□ 0.29
CALD1-204ENST00000417172 GPAMQ9HCL2 828 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 DOCK9Q9BZ29 2069 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 NIPSNAP2O75323 286 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 WISP3O95389 354 aaPredicted RBP16.88■□□□□ 0.29
CALD1-204ENST00000417172 EGFP01133 1207 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 SBK3P0C264 359 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 CCDC166P0CW27 439 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 NEFHP12036 1026 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 ALDH3A1P30838 453 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 ETV3P41162 512 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 POLD2P49005 469 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms