RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 PLEKHM1Q9Y4G2 1056 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 FLNBO75369 2602 aaKnown RBP14.35□□□□□ -0.11
PAF1-202ENST00000416728 A0A087X0T9 212 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 PYCARD-AS1I3L0S3 204 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 MATN3O15232 486 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 INPP4BO15327 924 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 MAP3K6O95382 1288 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 ASMTLO95671 621 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 FAM228BP0C875 321 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 THRAP10827 490 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 FGF3P11487 239 aaPredicted RBP14.34□□□□□ -0.11
PAF1-202ENST00000416728 WT1P19544 449 aaPredicted RBP14.34□□□□□ -0.11
PAF1-202ENST00000416728 CSF2RBP32927 897 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 CSTF2P33240 577 aaKnown RBP eCLIP14.34□□□□□ -0.11
PAF1-202ENST00000416728 PPM1FP49593 454 aaPredicted RBP14.34□□□□□ -0.11
PAF1-202ENST00000416728 ATP1A2P50993 1020 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 STC1P52823 247 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 GPLD1P80108 840 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 SQSTM1Q13501 440 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 DPYSL3Q14195 570 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 IQCB1Q15051 598 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 PAFAH1B3Q15102 231 aaKnown RBP14.34□□□□□ -0.11
PAF1-202ENST00000416728 IFI16Q16666 785 aaKnown RBP14.34□□□□□ -0.11
PAF1-202ENST00000416728 NCBP2-AS2Q69YL0 99 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 ALKBH5Q6P6C2 394 aaKnown RBP14.34□□□□□ -0.11
PAF1-202ENST00000416728 NRSN1Q8IZ57 195 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 JPH3Q8WXH2 748 aaPredicted RBP14.34□□□□□ -0.11
PAF1-202ENST00000416728 ART4Q93070 314 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 AGAP2Q99490 1192 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 RIOK2Q9BVS4 552 aaKnown RBP14.34□□□□□ -0.11
PAF1-202ENST00000416728 TDRD1Q9BXT4 1180 aaKnown RBP14.34□□□□□ -0.11
PAF1-202ENST00000416728 RBM22Q9NW64 420 aaKnown RBP eCLIP14.34□□□□□ -0.11
PAF1-202ENST00000416728 AMACRQ9UHK6 382 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 PCDHGA3Q9Y5H0 932 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 FAM87AP0C7U9 286 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 SFTPCP11686 197 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 CCNCP24863 283 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 MPSTP25325 297 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 FASLGP48023 281 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 ARSEP51690 589 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 RPL26P61254 145 aaKnown RBP14.34□□□□□ -0.11
PAF1-202ENST00000416728 TPM4P67936 248 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 CYP4F2P78329 520 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 ZBED6P86452 979 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 TMEM71Q6P5X7 295 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 RAVER1Q8IY67 606 aaKnown RBP14.34□□□□□ -0.11
PAF1-202ENST00000416728 KCTD6Q8NC69 237 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 LPCAT1Q8NF37 534 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 ZNF564Q8TBZ8 553 aaPredicted RBP14.34□□□□□ -0.11
PAF1-202ENST00000416728 SLC37A2Q8TED4 501 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 CPLX3Q8WVH0 158 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 FATE1Q969F0 183 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 AHCYL2Q96HN2 611 aaKnown RBP14.34□□□□□ -0.11
PAF1-202ENST00000416728 COX14Q96I36 57 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 TSGA13Q96PP4 275 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 SLC38A3Q99624 504 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 ZNF670Q9BS34 389 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 DDA1Q9BW61 102 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 CLMPQ9H6B4 373 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 ZNHIT2Q9UHR6 403 aa14.34□□□□□ -0.11
PAF1-202ENST00000416728 RPL26L1Q9UNX3 145 aaKnown RBP14.34□□□□□ -0.11
PAF1-202ENST00000416728 SCN8AQ9UQD0 1980 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 TRBV23OR9-2A0A075B6M9 112 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 DUX1O43812 170 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 CLDN7O95471 211 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 MX2P20592 715 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 PBX1P40424 430 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 ARSDP51689 593 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 FANCCQ00597 558 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 KCNC4Q03721 635 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 IHHQ14623 411 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 PDK2Q15119 407 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 TBR1Q16650 682 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 ATP13A4Q4VNC1 1196 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 ANKRD20A8PQ5CZ79 823 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 ZNF761Q86XN6 746 aaPredicted RBP14.33□□□□□ -0.12
PAF1-202ENST00000416728 FAM129CQ86XR2 697 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 MAP7D3Q8IWC1 876 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 SFRP1Q8N474 314 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 IL22RA1Q8N6P7 574 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 OR10G6Q8NH81 332 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 ARRDC2Q8TBH0 407 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 HTR3CQ8WXA8 447 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 NKD1Q969G9 470 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 PMEPA1Q969W9 287 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 IQCDQ96DY2 449 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 ASPSCR1Q9BZE9 553 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 PCDH9Q9HC56 1237 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 STARD5Q9NSY2 213 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 SLC39A1Q9NY26 324 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 TMEM9Q9P0T7 183 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 VPS18Q9P253 973 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 B3GALT1Q9Y5Z6 326 aa14.33□□□□□ -0.12
PAF1-202ENST00000416728 ARHGEF17Q96PE2 2063 aaPredicted RBP14.32□□□□□ -0.12
PAF1-202ENST00000416728 C1orf232A0A0U1RR37 186 aa14.32□□□□□ -0.12
PAF1-202ENST00000416728 WISP1O95388 367 aa14.32□□□□□ -0.12
PAF1-202ENST00000416728 PRLP01236 227 aa14.32□□□□□ -0.12
PAF1-202ENST00000416728 ATP1A1P05023 1023 aaKnown RBP14.32□□□□□ -0.12
PAF1-202ENST00000416728 HLA-DQB2P05538 268 aa14.32□□□□□ -0.12
PAF1-202ENST00000416728 UGT1A3P35503 534 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms