RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 ZCCHC18P0CG32 403 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 UQCRBP14927 111 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 ATP6V0D1P61421 351 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 ARF5P84085 180 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 MED21Q13503 144 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 LRP8Q14114 963 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 VEPH1Q14D04 833 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 TSNQ15631 228 aaKnown RBP12.31□□□□□ -0.44
UBA3-203ENST00000415609 UGT3A2Q3SY77 523 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 ZRANB3Q5FWF4 1079 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 RARS2Q5T160 578 aaKnown RBP12.31□□□□□ -0.44
UBA3-203ENST00000415609 SPOUT1Q5T280 376 aaKnown RBP12.31□□□□□ -0.44
UBA3-203ENST00000415609 OR52E8Q6IFG1 317 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 PSAPL1Q6NUJ1 521 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 PAOXQ6QHF9 649 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 LAYNQ6UX15 382 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.31□□□□□ -0.44
UBA3-203ENST00000415609 APLFQ8IW19 511 aaPredicted RBP12.31□□□□□ -0.44
UBA3-203ENST00000415609 CARNMT1Q8N4J0 409 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 IGSF21Q96ID5 467 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 KCNA7Q96RP8 456 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 DDX50Q9BQ39 737 aaKnown RBP12.31□□□□□ -0.44
UBA3-203ENST00000415609 KLF16Q9BXK1 252 aaPredicted RBP12.31□□□□□ -0.44
UBA3-203ENST00000415609 YIPF3Q9GZM5 350 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 UNC93B1Q9H1C4 597 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 HIPK3Q9H422 1215 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 AKTIPQ9H8T0 292 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 BPIFA1Q9NP55 256 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 MRPL40Q9NQ50 206 aaKnown RBP12.31□□□□□ -0.44
UBA3-203ENST00000415609 EPS15L1Q9UBC2 864 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 VPS9D1Q9Y2B5 631 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 MED16Q9Y2X0 877 aa12.31□□□□□ -0.44
UBA3-203ENST00000415609 ANKRD66B4E2M5 251 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 H0Y626 953 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 ACOT8O14734 319 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 PFDN6O15212 129 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 STX7O15400 261 aaKnown RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 KIF1CO43896 1103 aaKnown RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 TBL1XO60907 577 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 VPS26AO75436 327 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 ECI2O75521 394 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 CRCPO75575 148 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 ALDOCP09972 364 aaKnown RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 MBL2P11226 248 aaPredicted RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 ATP4BP51164 291 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 FOXA1P55317 472 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 NME5P56597 212 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 TWF1Q12792 350 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 TRAF2Q12933 501 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 ADGRE1Q14246 886 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 PTPRRQ15256 657 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 SETMARQ53H47 684 aaPredicted RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 FBXO48Q5FWF7 155 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 KANK2Q63ZY3 851 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 HERC6Q8IVU3 1022 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 ZNF461Q8TAF7 563 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 ASB9Q96DX5 294 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 MYRFLQ96LU7 910 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 TUBGCP5Q96RT8 1024 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 CYP2S1Q96SQ9 504 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 CFHR5Q9BXR6 569 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 COPS7BQ9H9Q2 264 aaPredicted RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 GPBP1L1Q9HC44 474 aaPredicted RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 SPAG4Q9NPE6 437 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 SUCOQ9UBS9 1254 aaKnown RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 GIMAP2Q9UG22 337 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 TRMT6Q9UJA5 497 aaKnown RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 IKZF3Q9UKT9 509 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 CAPN8A6NHC0 703 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 NCF1BA6NI72 391 aaPredicted RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 SYCE1LA8MT33 242 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 NCF1CA8MVU1 366 aaPredicted RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 CDC7O00311 574 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 BTN3A1O00481 513 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 OR1I1O60431 355 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 NRP2O60462 931 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 NIPSNAP2O75323 286 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 EFEMP2O95967 443 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 F11P03951 625 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 FGF4P08620 206 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 NCF1P14598 390 aaPredicted RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 PKMP14618 531 aaKnown RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 TTPAP49638 278 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 CLCQ05315 142 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 RALGDSQ12967 914 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 LCP2Q13094 533 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 PIANPQ8IYJ0 282 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 NKAPQ8N5F7 415 aaKnown RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 SIDT2Q8NBJ9 832 aaKnown RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 TTC16Q8NEE8 873 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 DCUN1D1Q96GG9 259 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 KLHL32Q96NJ5 620 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 SEMA4BQ9NPR2 832 aaPredicted RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 PDP2Q9P2J9 529 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 GALPQ9UBC7 116 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 BTRCQ9Y297 605 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 OAS3Q9Y6K5 1087 aaKnown RBP12.3□□□□□ -0.44
UBA3-203ENST00000415609 TANC1Q9C0D5 1861 aa12.3□□□□□ -0.44
UBA3-203ENST00000415609 GBF1Q92538 1859 aa12.29□□□□□ -0.44
UBA3-203ENST00000415609 A0A0U1RQS6 177 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms