RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 ZNF567Q8N184 647 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 CACTIN-AS1Q8N1I8 211 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 GPR26Q8NDV2 337 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 GPR156Q8NFN8 814 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 GPBAR1Q8TDU6 330 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 ZDHHC1Q8WTX9 485 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 PATE1Q8WXA2 126 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 HTR3CQ8WXA8 447 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 NAT6Q93015 286 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 CRELD1Q96HD1 420 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 GSDMCQ9BYG8 508 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 GPR63Q9BZJ6 419 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 FOXP3Q9BZS1 431 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 ZFYVE1Q9HBF4 777 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 TAAR2Q9P1P5 351 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 DNPEPQ9ULA0 475 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 CNOT6Q9ULM6 557 aaKnown RBP10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 LHX6Q9UPM6 363 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 SATB2Q9UPW6 733 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 SLC17A4Q9Y2C5 497 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 SPO11Q9Y5K1 396 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 PCYT1BQ9Y5K3 369 aaPredicted RBP10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 ENTPD2Q9Y5L3 495 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 COL5A1P20908 1838 aaPredicted RBP10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 A0A1W2PNU3 283 aaPredicted RBP10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 A0A1W2PQM1 296 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 BUD23O43709 281 aaKnown RBP10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 FTCDO95954 541 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 IVLP07476 585 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 CTNNA2P26232 953 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 TEAD1P28347 426 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 ALDH4A1P30038 563 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 ACTR1BP42025 376 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 WNT3AP56704 352 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 RWDD2BP57060 319 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 OR1D5P58170 312 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 ACTR1AP61163 376 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 OTUD4Q01804 1114 aaKnown RBP10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 CCDC173Q0VFZ6 552 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 KIF5AQ12840 1032 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 BIRC2Q13490 618 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 HLTFQ14527 1009 aaKnown RBP eCLIP10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 AMZ1Q400G9 498 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 C14orf28Q4W4Y0 310 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 PYCR3Q53H96 274 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 BBS12Q6ZW61 710 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 ZNF765Q7L2R6 523 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 CHST15Q7LFX5 561 aaPredicted RBP10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 TMC3Q7Z5M5 1100 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 B3GNT8Q7Z7M8 397 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 NLRP8Q86W28 1048 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 IPMKQ8NFU5 416 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 ALG3Q92685 438 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 TADA1Q96BN2 335 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 OXNAD1Q96HP4 312 aaPredicted RBP10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 OR2M4Q96R27 311 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 GFM1Q96RP9 751 aaKnown RBP10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 LYSMD1Q96S90 227 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 SPATA16Q9BXB7 569 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 OSBPL8Q9BZF1 889 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 LRRN3Q9H3W5 708 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 MAGEE1Q9HCI5 957 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 EPB41L5Q9HCM4 733 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 WDR70Q9NW82 654 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 TRNAU1APQ9NX07 287 aaKnown RBP10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 DKK4Q9UBT3 224 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 FAM153AQ9UHL3 310 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 RSPH14Q9UHP6 348 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 AMFRQ9UKV5 643 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 ZNF711Q9Y462 761 aa10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 TDRD6O60522 2096 aaKnown RBP10.11□□□□□ -0.79
NCKIPSD-202ENST00000413374 CCDC66A2RUB6 948 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 RHPN2P1A8MT19 583 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 BTNL10A8MVZ5 291 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 APOC4-APOC2K7ER74 178 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 NTN3O00634 580 aaPredicted RBP10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 PJA2O43164 708 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 B4GAT1O43505 415 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 SNX2O60749 519 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 MTX2O75431 263 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 NDST3O95803 873 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 AGTP01019 485 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 APOC2P02655 101 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 PTMAP06454 111 aaKnown RBP10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 GLB1P16278 677 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 BPIP17213 487 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 CDC25BP30305 580 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 PPM1FP49593 454 aaPredicted RBP10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 EIF3EP60228 445 aaKnown RBP10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 OLIG2Q13516 323 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 PPP2R5EQ16537 467 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 SIRPB2Q5JXA9 342 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 HENMT1Q5T8I9 393 aaKnown RBP10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 DARS2Q6PI48 645 aaKnown RBP10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 KDELC1Q6UW63 502 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 USP53Q70EK8 1073 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 PEX26Q7Z412 305 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 GALNT13Q8IUC8 556 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 CCNJLQ8IV13 435 aa10.1□□□□□ -0.79
NCKIPSD-202ENST00000413374 ARL14Q8N4G2 192 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms