RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 FAM47BQ8NA70 645 aa13.77□□□□□ -0.2
NUB1-201ENST00000413040 TSPAN14Q8NG11 270 aa13.77□□□□□ -0.2
NUB1-201ENST00000413040 CRISPLD1Q9H336 500 aa13.77□□□□□ -0.2
NUB1-201ENST00000413040 NDUFA13Q9P0J0 144 aa13.77□□□□□ -0.2
NUB1-201ENST00000413040 SPO11Q9Y5K1 396 aa13.77□□□□□ -0.2
NUB1-201ENST00000413040 LOC285095A0A1B0GVY8 99 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 MTHFD2P13995 350 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 NCK1P16333 377 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 GPX3P22352 226 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 FDXRP22570 491 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 C16orf59Q7L2K0 433 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 TAS2R42Q7RTR8 314 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 STAG3L4Q8TBR4 150 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 MRPS26Q9BYN8 205 aaKnown RBP13.77□□□□□ -0.21
NUB1-201ENST00000413040 POLR3BQ9NW08 1133 aaPredicted RBP13.77□□□□□ -0.21
NUB1-201ENST00000413040 MAP10Q9P2G4 905 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 PLOD2O00469 737 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 GPR39O43194 453 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 NIPSNAP2O75323 286 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 LSAMPQ13449 338 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 RABL3Q5HYI8 236 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 C6orf10Q5SRN2 563 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 SLC24A5Q71RS6 500 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 ZNF683Q8IZ20 524 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 OR2T34Q8NGX1 318 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 OR2T3Q8NH03 318 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 CDK15Q96Q40 435 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 AARSD1Q9BTE6 412 aaKnown RBP13.77□□□□□ -0.21
NUB1-201ENST00000413040 TUBB1Q9H4B7 451 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 CD274Q9NZQ7 290 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 GALPQ9UBC7 116 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 POLG2Q9UHN1 485 aa13.77□□□□□ -0.21
NUB1-201ENST00000413040 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.77□□□□□ -0.21
NUB1-201ENST00000413040 CLIC3O95833 236 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 STC1P52823 247 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 PRKCZQ05513 592 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 RAD51Q06609 339 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 UGT3A2Q3SY77 523 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 PARP15Q460N3 678 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 HMBOX1Q6NT76 420 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 LINGO4Q6UY18 593 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 ZNF598Q86UK7 904 aaKnown RBP13.76□□□□□ -0.21
NUB1-201ENST00000413040 DENND1CQ8IV53 801 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 SLC15A3Q8IY34 581 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 ZNF786Q8N393 782 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 CBR4Q8N4T8 237 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 L3HYPDHQ96EM0 354 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 C8orf48Q96LL4 319 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 SEPHS2Q99611 448 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 LIN28AQ9H9Z2 209 aaKnown RBP13.76□□□□□ -0.21
NUB1-201ENST00000413040 SYTL2Q9HCH5 934 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 MRGBPQ9NV56 204 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 TMEM181Q9P2C4 612 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 RNF11Q9Y3C5 154 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 DHRS12A0PJE2 317 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 ARHGAP10A1A4S6 786 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 IQCF5A8MTL0 148 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 E5RI56 91 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 SOCS2O14508 198 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 VILLO15195 856 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 OR1I1O60431 355 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 SNX2O60749 519 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 OAZ2O95190 189 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 NDST3O95803 873 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 PRKAR2AP13861 404 aaKnown RBP13.76□□□□□ -0.21
NUB1-201ENST00000413040 IL10P22301 178 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 RPL26P61254 145 aaKnown RBP13.76□□□□□ -0.21
NUB1-201ENST00000413040 CYP51A1Q16850 503 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 NADSYN1Q6IA69 706 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 CDYL2Q8N8U2 506 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 TMIGD2Q96BF3 282 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 FUBP3Q96I24 572 aaKnown RBP eCLIP13.76□□□□□ -0.21
NUB1-201ENST00000413040 ZFRQ96KR1 1074 aaKnown RBP13.76□□□□□ -0.21
NUB1-201ENST00000413040 OCEL1Q9H607 264 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 CD300AQ9UGN4 299 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 IKZF3Q9UKT9 509 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 ZFP37Q9Y6Q3 630 aaPredicted RBP13.76□□□□□ -0.21
NUB1-201ENST00000413040 SCN10AQ9Y5Y9 1956 aa13.76□□□□□ -0.21
NUB1-201ENST00000413040 PRAMEF11O60813 436 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 ECI2O75521 394 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 RTN3O95197 1032 aaPredicted RBP13.75□□□□□ -0.21
NUB1-201ENST00000413040 C8BP07358 591 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 ITGB6P18564 788 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 KCNK10P57789 538 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 NRG1Q02297 640 aaPredicted RBP13.75□□□□□ -0.21
NUB1-201ENST00000413040 TWF1Q12792 350 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 SLC14A2Q15849 920 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 UGT3A1Q6NUS8 523 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 RNF19BQ6ZMZ0 732 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 TMEM126BQ8IUX1 230 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 COLGALT2Q8IYK4 626 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 SIDT2Q8NBJ9 832 aaKnown RBP13.75□□□□□ -0.21
NUB1-201ENST00000413040 CYGBQ8WWM9 190 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 FEM1CQ96JP0 617 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 TMEM74Q96NL1 305 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 ATOH8Q96SQ7 321 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 HGH1Q9BTY7 390 aa13.75□□□□□ -0.21
NUB1-201ENST00000413040 UBA2Q9UBT2 640 aaPredicted RBP13.75□□□□□ -0.21
NUB1-201ENST00000413040 ADAMTS4O75173 837 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms