RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 EI24O14681 340 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 MUSKO15146 869 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 VILLO15195 856 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 MAGEB3O15480 346 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 HNRNPCP07910 306 aaKnown RBP eCLIP12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 CNPP09543 421 aaKnown RBP12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 OXTRP30559 389 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 CYP2C18P33260 490 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 HSPA13P48723 471 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 DGKQP52824 942 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 KCNA10Q16322 511 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 IL27RAQ6UWB1 636 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 STK32CQ86UX6 486 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 CPNE9Q8IYJ1 553 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 RNF217Q8TC41 542 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 ISL2Q96A47 359 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 ZFRQ96KR1 1074 aaKnown RBP12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 NOL6Q9H6R4 1146 aaKnown RBP12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 ATP13A1Q9HD20 1204 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 TDRKHQ9Y2W6 561 aaKnown RBP12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 KANSL1LA0AUZ9 987 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 DNAJB2P25686 324 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 MTPNP58546 118 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 XKR4Q5GH76 650 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 SPOUT1Q5T280 376 aaKnown RBP12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 FAM45BPQ6NSW5 357 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 FAM45AQ8TCE6 357 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 IRGQQ8WZA9 623 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 MYEOVQ96EZ4 313 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 C17orf80Q9BSJ5 609 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 SMOC2Q9H3U7 446 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 POLR1BQ9H9Y6 1135 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 LATS2Q9NRM7 1088 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 NDUFA13Q9P0J0 144 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 PCDHB5Q9Y5E4 795 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 PRSS51A0A1B0GVH4 220 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 HTRA2O43464 458 aaPredicted RBP12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 B4GALT3O60512 393 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 NOL3O60936 208 aaKnown RBP12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 E2F6O75461 281 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 STT3AP46977 705 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 HERVK_113P63132 956 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 TSTA3Q13630 321 aaPredicted RBP12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 LRP8Q14114 963 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 IHHQ14623 411 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 KIAA1841Q6NSI8 718 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 CPSF7Q8N684 471 aaKnown RBP12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 TMEM102Q8N9M5 508 aaPredicted RBP12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 HMGCLL1Q8TB92 370 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 DDI1Q8WTU0 396 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 ZFAND2BQ8WV99 257 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 IMP4Q96G21 291 aaKnown RBP12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 ERVK-6Q9BXR3 956 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 GPR63Q9BZJ6 419 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 TRIM15Q9C019 465 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 PCDH10Q9P2E7 1040 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 FKBPLQ9UIM3 349 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 RNF11Q9Y3C5 154 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 U3KQV3 271 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 NDST2P52849 883 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 LIPEQ05469 1076 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 KDELC1Q6UW63 502 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 FUNDC1Q8IVP5 155 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 PGBD5Q8N414 524 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 LINGO1Q96FE5 620 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 PGAP3Q96FM1 320 aaPredicted RBP12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 TCF12Q99081 682 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 RGPD3A6NKT7 1758 aaPredicted RBP12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 RGPD4Q7Z3J3 1758 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 GLTPD2A6NH11 291 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 MAN1A2O60476 641 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 H6PDO95479 791 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 HMOX2P30519 316 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 ADRA1AP35348 466 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 VARS2Q5ST30 1063 aaKnown RBP12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 MFSD14CQ5VZR4 134 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 UGT3A1Q6NUS8 523 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 ZNF549Q6P9A3 640 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 SLC15A3Q8IY34 581 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 STAG3L4Q8TBR4 150 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 HSPBAP1Q96EW2 488 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 CDKN2AIPNLQ96HQ2 116 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 CCDC138Q96M89 665 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 OSBPL11Q9BXB4 747 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 PLK2Q9NYY3 685 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 RSL24D1Q9UHA3 163 aaKnown RBP12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 PARP14Q460N5 1801 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 DENRO43583 198 aaKnown RBP12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 ECI2O75521 394 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 TFPTP0C1Z6 253 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 SLC2A4P14672 509 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 RHOQP17081 205 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 SLC7A1P30825 629 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 LEPRP48357 1165 aaKnown RBP12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 FLT3LGP49771 235 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 OXCT1P55809 520 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 ADAM17P78536 824 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 AAK1Q2M2I8 961 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 PTRHD1Q6GMV3 140 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms