RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 PSMD11O00231 422 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 ETV3P41162 512 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 MAGEA12P43365 314 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 GYS2P54840 703 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 SLC18A2Q05940 514 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 FZD5Q13467 585 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 ZDHHC20Q5W0Z9 365 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 SNX20Q7Z614 316 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 COQ10AQ96MF6 247 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 INTS10Q9NVR2 710 aaKnown RBP27.36■■□□□ 1.97
CPNE1-203ENST00000397442 NFKBIL1Q9UBC1 381 aaPredicted RBP27.36■■□□□ 1.97
CPNE1-203ENST00000397442 CD84Q9UIB8 345 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 A0A1W2PP55 124 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 TPP1O14773 563 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 PYGBP11216 843 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 PMLP29590 882 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 CSRP3P50461 194 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 DCDC1P59894 354 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 MPP2Q14168 576 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP27.36■■□□□ 1.97
CPNE1-203ENST00000397442 KDM7AQ6ZMT4 941 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 HDDC3Q8N4P3 179 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 LPGAT1Q92604 370 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 SMC6Q96SB8 1091 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 ASB8Q9H765 288 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 CAB39LQ9H9S4 337 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 FBXL21Q9UKT6 434 aa27.36■■□□□ 1.97
CPNE1-203ENST00000397442 PLXNB3Q9ULL4 1909 aa27.35■■□□□ 1.97
CPNE1-203ENST00000397442 UGT1A6P19224 532 aa27.35■■□□□ 1.97
CPNE1-203ENST00000397442 UGT1A1P22309 533 aa27.35■■□□□ 1.97
CPNE1-203ENST00000397442 UGT1A4P22310 534 aa27.35■■□□□ 1.97
CPNE1-203ENST00000397442 UGT1A3P35503 534 aa27.35■■□□□ 1.97
CPNE1-203ENST00000397442 UGT1A5P35504 534 aa27.35■■□□□ 1.97
CPNE1-203ENST00000397442 CCNFP41002 786 aa27.35■■□□□ 1.97
CPNE1-203ENST00000397442 CRY1Q16526 586 aa27.35■■□□□ 1.97
CPNE1-203ENST00000397442 RBM20Q5T481 1227 aaKnown RBP27.35■■□□□ 1.97
CPNE1-203ENST00000397442 BANPQ8N9N5 519 aa27.35■■□□□ 1.97
CPNE1-203ENST00000397442 ZNF398Q8TD17 642 aa27.35■■□□□ 1.97
CPNE1-203ENST00000397442 SCAMP4Q969E2 229 aa27.35■■□□□ 1.97
CPNE1-203ENST00000397442 SSU72Q9NP77 194 aaKnown RBP27.35■■□□□ 1.97
CPNE1-203ENST00000397442 LTB4R2Q9NPC1 389 aa27.35■■□□□ 1.97
CPNE1-203ENST00000397442 SNX15Q9NRS6 342 aa27.35■■□□□ 1.97
CPNE1-203ENST00000397442 CRYL1Q9Y2S2 319 aa27.35■■□□□ 1.97
CPNE1-203ENST00000397442 FAM95CA0A1B0GW59 222 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 RGSL1A5PLK6 1076 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 AP1G1O43747 822 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 TYROBPO43914 113 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 SPAG7O75391 227 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 ITGALP20701 1170 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 TTPAP49638 278 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 CLCN5P51795 746 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 PPARDQ03181 441 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 AARS2Q5JTZ9 985 aaKnown RBP27.34■■□□□ 1.97
CPNE1-203ENST00000397442 ZNF549Q6P9A3 640 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 TAS2R42Q7RTR8 314 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 CMC1Q7Z7K0 106 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 RAVER1Q8IY67 606 aaKnown RBP27.34■■□□□ 1.97
CPNE1-203ENST00000397442 MRGPRX1Q96LB2 322 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 OMDQ99983 421 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 FAM83DQ9H4H8 585 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 LMAN1LQ9HAT1 526 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 SLC39A10Q9ULF5 831 aa27.34■■□□□ 1.97
CPNE1-203ENST00000397442 SERPINB8P50452 374 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 CREB5Q02930 508 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 ACOX1Q15067 660 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 GPR33Q49SQ1 333 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 HENMT1Q5T8I9 393 aaKnown RBP27.33■■□□□ 1.97
CPNE1-203ENST00000397442 SYNPOQ8N3V7 929 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 DTX3LQ8TDB6 740 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 SHDQ96IW2 340 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 NDNQ99608 321 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 FBXL12Q9NXK8 326 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 MRPS17Q9Y2R5 130 aaKnown RBP27.33■■□□□ 1.97
CPNE1-203ENST00000397442 KANSL1LA0AUZ9 987 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 TMEM120BA0PK00 339 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 NEMP1O14524 444 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 MMP20O60882 483 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 RNASEH2AO75792 299 aaKnown RBP27.33■■□□□ 1.97
CPNE1-203ENST00000397442 DNTTP04053 509 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 C6P13671 934 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 POLD2P49005 469 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 ATP1A2P50993 1020 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 DBN1Q16643 649 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 ATP13A5Q4VNC0 1218 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 CERS6Q6ZMG9 384 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 SERPINA9Q86WD7 417 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 SLC41A1Q8IVJ1 513 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 SIX5Q8N196 739 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 GPATCH11Q8N954 259 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 ACMSDQ8TDX5 336 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 ATXN2LQ8WWM7 1075 aaKnown RBP27.33■■□□□ 1.97
CPNE1-203ENST00000397442 ALKBH8Q96BT7 664 aaKnown RBP27.33■■□□□ 1.97
CPNE1-203ENST00000397442 DTD2Q96FN9 168 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 SELENOSQ9BQE4 189 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 CDH19Q9H159 772 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 RAD18Q9NS91 495 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 TMPRSS11EQ9UL52 423 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 COQ6Q9Y2Z9 468 aa27.33■■□□□ 1.97
CPNE1-203ENST00000397442 CHURC1-FNTBB4DL54 471 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 WNT9AO14904 365 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms