RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 PTGDR2Q9Y5Y4 395 aa15.01□□□□□ -0.01
GPC3-202ENST00000394299 WASF2Q9Y6W5 498 aa15.01□□□□□ -0.01
GPC3-202ENST00000394299 TBX10O75333 385 aa15□□□□□ -0.01
GPC3-202ENST00000394299 LATS1O95835 1130 aa15□□□□□ -0.01
GPC3-202ENST00000394299 PTDSS1P48651 473 aaKnown RBP15□□□□□ -0.01
GPC3-202ENST00000394299 SH3BP2P78314 561 aa15□□□□□ -0.01
GPC3-202ENST00000394299 SLC7A9P82251 487 aa15□□□□□ -0.01
GPC3-202ENST00000394299 ASTLQ6HA08 431 aaPredicted RBP15□□□□□ -0.01
GPC3-202ENST00000394299 CYHR1Q6ZMK1 362 aa15□□□□□ -0.01
GPC3-202ENST00000394299 GIMAP7Q8NHV1 300 aa15□□□□□ -0.01
GPC3-202ENST00000394299 BADQ92934 168 aa15□□□□□ -0.01
GPC3-202ENST00000394299 ATOH8Q96SQ7 321 aa15□□□□□ -0.01
GPC3-202ENST00000394299 CCDC68Q9H2F9 335 aa15□□□□□ -0.01
GPC3-202ENST00000394299 TAS2R13Q9NYV9 303 aa15□□□□□ -0.01
GPC3-202ENST00000394299 ZNF711Q9Y462 761 aa15□□□□□ -0.01
GPC3-202ENST00000394299 ASB3Q9Y575 518 aa15□□□□□ -0.01
GPC3-202ENST00000394299 HCFC2Q9Y5Z7 792 aa15□□□□□ -0.01
GPC3-202ENST00000394299 COPG1Q9Y678 874 aaKnown RBP15□□□□□ -0.01
GPC3-202ENST00000394299 SLC4A7Q9Y6M7 1214 aa15□□□□□ -0.01
GPC3-202ENST00000394299 OBSL1O75147 1896 aa15□□□□□ -0.01
GPC3-202ENST00000394299 TRAV19A0A0A6YYK7 116 aa15□□□□□ -0.01
GPC3-202ENST00000394299 PGLSO95336 258 aa15□□□□□ -0.01
GPC3-202ENST00000394299 CLDN7O95471 211 aa15□□□□□ -0.01
GPC3-202ENST00000394299 FOXA1P55317 472 aa15□□□□□ -0.01
GPC3-202ENST00000394299 ARMC12Q5T9G4 340 aa15□□□□□ -0.01
GPC3-202ENST00000394299 C1orf146Q5VVC0 180 aa15□□□□□ -0.01
GPC3-202ENST00000394299 FAM151BQ6UXP7 276 aa15□□□□□ -0.01
GPC3-202ENST00000394299 NECAB2Q7Z6G3 386 aa15□□□□□ -0.01
GPC3-202ENST00000394299 TMEM25Q86YD3 366 aa15□□□□□ -0.01
GPC3-202ENST00000394299 HPS6Q86YV9 775 aa15□□□□□ -0.01
GPC3-202ENST00000394299 ARHGAP24Q8N264 748 aa15□□□□□ -0.01
GPC3-202ENST00000394299 CFAP61Q8NHU2 1237 aa15□□□□□ -0.01
GPC3-202ENST00000394299 NRG4Q8WWG1 115 aa15□□□□□ -0.01
GPC3-202ENST00000394299 KCNA7Q96RP8 456 aa15□□□□□ -0.01
GPC3-202ENST00000394299 C2orf49Q9BVC5 232 aaPredicted RBP15□□□□□ -0.01
GPC3-202ENST00000394299 ZNF385DQ9H6B1 395 aa15□□□□□ -0.01
GPC3-202ENST00000394299 ABCB8Q9NUT2 735 aa15□□□□□ -0.01
GPC3-202ENST00000394299 GIMAP2Q9UG22 337 aa15□□□□□ -0.01
GPC3-202ENST00000394299 TRAF6Q9Y4K3 522 aa15□□□□□ -0.01
GPC3-202ENST00000394299 KIAA1671Q9BY89 1806 aa15□□□□□ -0.01
GPC3-202ENST00000394299 ANKRD12Q6UB98 2062 aa15□□□□□ -0.01
GPC3-202ENST00000394299 NPEPPSL1A6NEC2 478 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 SLCO1B7G3V0H7 640 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 TRIM24O15164 1050 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 FGBP02675 491 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 PKMP14618 531 aaKnown RBP14.99□□□□□ -0.01
GPC3-202ENST00000394299 CHRM3P20309 590 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 HLA-FP30511 346 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 SLC26A3P40879 764 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 GTF2A1P52655 376 aaPredicted RBP14.99□□□□□ -0.01
GPC3-202ENST00000394299 NTHL1P78549 312 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 HTRA4P83105 476 aaPredicted RBP14.99□□□□□ -0.01
GPC3-202ENST00000394299 PLEKHG6Q3KR16 790 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 RETSATQ6NUM9 610 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 FBXO46Q6PJ61 603 aaPredicted RBP14.99□□□□□ -0.01
GPC3-202ENST00000394299 SLC22A9Q8IVM8 553 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 EEF1AKMT1Q8WVE0 214 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 CCDC126Q96EE4 140 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 MYO19Q96H55 970 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 C3orf30Q96M34 536 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 BOCQ9BWV1 1114 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 LINC00597Q9H2U6 94 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 YY1AP1Q9H869 796 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 FBRSL1Q9HCM7 1045 aaKnown RBP14.99□□□□□ -0.01
GPC3-202ENST00000394299 RPL26L1Q9UNX3 145 aaKnown RBP14.99□□□□□ -0.01
GPC3-202ENST00000394299 EFCAB14O75071 495 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 SMIM24O75264 130 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 ADH1AP07327 375 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 GFAPP14136 432 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 ITGB6P18564 788 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 UGT1A6P19224 532 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 UGT1A1P22309 533 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 UGT1A4P22310 534 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 PSMA3P25788 255 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 UGT1A3P35503 534 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 UGT1A5P35504 534 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 MSX2P35548 267 aaPredicted RBP14.99□□□□□ -0.01
GPC3-202ENST00000394299 AGTR2P50052 363 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 HERVK_113P63132 956 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 TEAD2Q15562 447 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 MPPE1Q53F39 396 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 TCHHL1Q5QJ38 904 aaPredicted RBP14.99□□□□□ -0.01
GPC3-202ENST00000394299 ZNF697Q5TEC3 545 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 HIPK4Q8NE63 616 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 TRPC4APQ8TEL6 797 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 VOPP1Q96AW1 172 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 MAELQ96JY0 434 aaKnown RBP14.99□□□□□ -0.01
GPC3-202ENST00000394299 ERVK-6Q9BXR3 956 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 ASAH2Q9NR71 780 aa14.99□□□□□ -0.01
GPC3-202ENST00000394299 RGSL1A5PLK6 1076 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 SUPT3HB4E1H0 165 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 SUPT3HO75486 399 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 BAIAP3O94812 1187 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 HNF1BP35680 557 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 PPARGP37231 505 aaPredicted RBP14.98□□□□□ -0.01
GPC3-202ENST00000394299 NUDT2P50583 147 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 ECT2LQ008S8 904 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 BCL2L1Q07817 233 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 SLC5A9Q2M3M2 681 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 TSPAN33Q86UF1 283 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms