RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 KCNK4Q9NYG8 393 aa26.27■■□□□ 1.8
NPHP3-202ENST00000383282 PCDHGA4Q9Y5G9 962 aa26.27■■□□□ 1.8
NPHP3-202ENST00000383282 IGHV1OR21-1A0A087WYE8 117 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 IQCJ-SCHIP1C9J366 451 aaPredicted RBP26.26■■□□□ 1.79
NPHP3-202ENST00000383282 ASMTLO95671 621 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 CSTF2P33240 577 aaKnown RBP eCLIP26.26■■□□□ 1.79
NPHP3-202ENST00000383282 ATP1A2P50993 1020 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 ZBED6P86452 979 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 DSC2Q02487 901 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 PYCR3Q53H96 274 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 ALG1LQ6GMV1 187 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 ALKBH5Q6P6C2 394 aaKnown RBP26.26■■□□□ 1.79
NPHP3-202ENST00000383282 TRIM74Q86UV6 250 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 MAP7D3Q8IWC1 876 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 RAVER1Q8IY67 606 aaKnown RBP26.26■■□□□ 1.79
NPHP3-202ENST00000383282 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.26■■□□□ 1.79
NPHP3-202ENST00000383282 EXD3Q8N9H8 876 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 KCTD6Q8NC69 237 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 AGBL5Q8NDL9 886 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 ZNF564Q8TBZ8 553 aaPredicted RBP26.26■■□□□ 1.79
NPHP3-202ENST00000383282 CPLX3Q8WVH0 158 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 TDRD1Q9BXT4 1180 aaKnown RBP26.26■■□□□ 1.79
NPHP3-202ENST00000383282 FAM117AQ9C073 453 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 CHKBQ9Y259 395 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 PLEKHM1Q9Y4G2 1056 aa26.26■■□□□ 1.79
NPHP3-202ENST00000383282 A0A087X0T9 212 aa26.25■■□□□ 1.79
NPHP3-202ENST00000383282 FAM228BP0C875 321 aa26.25■■□□□ 1.79
NPHP3-202ENST00000383282 CCNCP24863 283 aa26.25■■□□□ 1.79
NPHP3-202ENST00000383282 STC1P52823 247 aa26.25■■□□□ 1.79
NPHP3-202ENST00000383282 UBASH3AP57075 661 aa26.25■■□□□ 1.79
NPHP3-202ENST00000383282 GPLD1P80108 840 aa26.25■■□□□ 1.79
NPHP3-202ENST00000383282 FANCCQ00597 558 aa26.25■■□□□ 1.79
NPHP3-202ENST00000383282 NFATC3Q12968 1075 aa26.25■■□□□ 1.79
NPHP3-202ENST00000383282 SQSTM1Q13501 440 aa26.25■■□□□ 1.79
NPHP3-202ENST00000383282 DPYSL3Q14195 570 aa26.25■■□□□ 1.79
NPHP3-202ENST00000383282 NKAIN2Q5VXU1 208 aa26.25■■□□□ 1.79
NPHP3-202ENST00000383282 FATE1Q969F0 183 aa26.25■■□□□ 1.79
NPHP3-202ENST00000383282 AHCYL2Q96HN2 611 aaKnown RBP26.25■■□□□ 1.79
NPHP3-202ENST00000383282 ZNF670Q9BS34 389 aa26.25■■□□□ 1.79
NPHP3-202ENST00000383282 GOLGA6L19H0YKK7 550 aa26.24■■□□□ 1.79
NPHP3-202ENST00000383282 INPP4BO15327 924 aa26.24■■□□□ 1.79
NPHP3-202ENST00000383282 SFTPCP11686 197 aa26.24■■□□□ 1.79
NPHP3-202ENST00000383282 MX2P20592 715 aa26.24■■□□□ 1.79
NPHP3-202ENST00000383282 ARSEP51690 589 aa26.24■■□□□ 1.79
NPHP3-202ENST00000383282 RPL26P61254 145 aaKnown RBP26.24■■□□□ 1.79
NPHP3-202ENST00000383282 PDK2Q15119 407 aa26.24■■□□□ 1.79
NPHP3-202ENST00000383282 PRICKLE2Q7Z3G6 844 aa26.24■■□□□ 1.79
NPHP3-202ENST00000383282 LPCAT1Q8NF37 534 aa26.24■■□□□ 1.79
NPHP3-202ENST00000383282 COX14Q96I36 57 aa26.24■■□□□ 1.79
NPHP3-202ENST00000383282 SMIM14Q96QK8 99 aa26.24■■□□□ 1.79
NPHP3-202ENST00000383282 AGAP2Q99490 1192 aa26.24■■□□□ 1.79
NPHP3-202ENST00000383282 SLC38A3Q99624 504 aa26.24■■□□□ 1.79
NPHP3-202ENST00000383282 RIOK2Q9BVS4 552 aaKnown RBP26.24■■□□□ 1.79
NPHP3-202ENST00000383282 CBX8Q9HC52 389 aa26.24■■□□□ 1.79
NPHP3-202ENST00000383282 CAPN11Q9UMQ6 739 aa26.24■■□□□ 1.79
NPHP3-202ENST00000383282 RPL26L1Q9UNX3 145 aaKnown RBP26.24■■□□□ 1.79
NPHP3-202ENST00000383282 LUC7L2Q9Y383 392 aaKnown RBP26.24■■□□□ 1.79
NPHP3-202ENST00000383282 PCDHGA3Q9Y5H0 932 aa26.24■■□□□ 1.79
NPHP3-202ENST00000383282 MAP3K6O95382 1288 aa26.23■■□□□ 1.79
NPHP3-202ENST00000383282 THRAP10827 490 aa26.23■■□□□ 1.79
NPHP3-202ENST00000383282 FGF3P11487 239 aaPredicted RBP26.23■■□□□ 1.79
NPHP3-202ENST00000383282 PBX1P40424 430 aa26.23■■□□□ 1.79
NPHP3-202ENST00000383282 FASLGP48023 281 aa26.23■■□□□ 1.79
NPHP3-202ENST00000383282 ANKRD20A8PQ5CZ79 823 aa26.23■■□□□ 1.79
NPHP3-202ENST00000383282 TMEM71Q6P5X7 295 aa26.23■■□□□ 1.79
NPHP3-202ENST00000383282 OR10G6Q8NH81 332 aa26.23■■□□□ 1.79
NPHP3-202ENST00000383282 TSGA13Q96PP4 275 aa26.23■■□□□ 1.79
NPHP3-202ENST00000383282 STN1Q9H668 368 aaKnown RBP26.23■■□□□ 1.79
NPHP3-202ENST00000383282 PCDH9Q9HC56 1237 aa26.23■■□□□ 1.79
NPHP3-202ENST00000383282 VPS18Q9P253 973 aa26.23■■□□□ 1.79
NPHP3-202ENST00000383282 CTTNBP2NLQ9P2B4 639 aa26.23■■□□□ 1.79
NPHP3-202ENST00000383282 ZNHIT2Q9UHR6 403 aa26.23■■□□□ 1.79
NPHP3-202ENST00000383282 DUX1O43812 170 aa26.22■■□□□ 1.79
NPHP3-202ENST00000383282 CLDN7O95471 211 aa26.22■■□□□ 1.79
NPHP3-202ENST00000383282 CSF2RBP32927 897 aa26.22■■□□□ 1.79
NPHP3-202ENST00000383282 ATP13A4Q4VNC1 1196 aa26.22■■□□□ 1.79
NPHP3-202ENST00000383282 ZFYVE27Q5T4F4 411 aa26.22■■□□□ 1.79
NPHP3-202ENST00000383282 SLC37A2Q8TED4 501 aa26.22■■□□□ 1.79
NPHP3-202ENST00000383282 JPH3Q8WXH2 748 aaPredicted RBP26.22■■□□□ 1.79
NPHP3-202ENST00000383282 LCMT1Q9UIC8 334 aa26.22■■□□□ 1.79
NPHP3-202ENST00000383282 TRBV23OR9-2A0A075B6M9 112 aa26.21■■□□□ 1.79
NPHP3-202ENST00000383282 KRT7P08729 469 aa26.21■■□□□ 1.79
NPHP3-202ENST00000383282 MPSTP25325 297 aa26.21■■□□□ 1.79
NPHP3-202ENST00000383282 LUZP1Q86V48 1076 aa26.21■■□□□ 1.79
NPHP3-202ENST00000383282 SFRP1Q8N474 314 aa26.21■■□□□ 1.79
NPHP3-202ENST00000383282 IL22RA1Q8N6P7 574 aa26.21■■□□□ 1.79
NPHP3-202ENST00000383282 ARRDC2Q8TBH0 407 aa26.21■■□□□ 1.79
NPHP3-202ENST00000383282 CCHCR1Q8TD31 782 aa26.21■■□□□ 1.79
NPHP3-202ENST00000383282 ART4Q93070 314 aa26.21■■□□□ 1.79
NPHP3-202ENST00000383282 ZNF830Q96NB3 372 aaPredicted RBP26.21■■□□□ 1.79
NPHP3-202ENST00000383282 LYSMD1Q96S90 227 aa26.21■■□□□ 1.79
NPHP3-202ENST00000383282 DDA1Q9BW61 102 aa26.21■■□□□ 1.79
NPHP3-202ENST00000383282 ASPSCR1Q9BZE9 553 aa26.21■■□□□ 1.79
NPHP3-202ENST00000383282 SLC39A1Q9NY26 324 aa26.21■■□□□ 1.79
NPHP3-202ENST00000383282 PKD2L2Q9NZM6 624 aa26.21■■□□□ 1.79
NPHP3-202ENST00000383282 UVRAGQ9P2Y5 699 aa26.21■■□□□ 1.79
NPHP3-202ENST00000383282 C1orf232A0A0U1RR37 186 aa26.2■■□□□ 1.78
NPHP3-202ENST00000383282 PROSCO94903 275 aa26.2■■□□□ 1.78
NPHP3-202ENST00000383282 PRLP01236 227 aa26.2■■□□□ 1.78
NPHP3-202ENST00000383282 HLA-DQB2P05538 268 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms