RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 EXD3Q8N9H8 876 aa16.77■□□□□ 0.28
SMN2-201ENST00000380741 LRRN4Q8WUT4 740 aa16.77■□□□□ 0.28
SMN2-201ENST00000380741 ZNF670Q9BS34 389 aa16.77■□□□□ 0.28
SMN2-201ENST00000380741 RBM22Q9NW64 420 aaKnown RBP eCLIP16.77■□□□□ 0.28
SMN2-201ENST00000380741 CAPN11Q9UMQ6 739 aa16.77■□□□□ 0.28
SMN2-201ENST00000380741 CHKBQ9Y259 395 aa16.77■□□□□ 0.28
SMN2-201ENST00000380741 IGHV1OR21-1A0A087WYE8 117 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 SYCE3A1L190 88 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 INPP4BO15327 924 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 PRLP01236 227 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 HLA-DQB2P05538 268 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 PYGLP06737 847 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 WT1P19544 449 aaPredicted RBP16.76■□□□□ 0.27
SMN2-201ENST00000380741 CCNCP24863 283 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 CD82P27701 267 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 CSF2RBP32927 897 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 LIMK2P53671 638 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 TAS2R40P59535 323 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 TPM4P67936 248 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 IFI16Q16666 785 aaKnown RBP16.76■□□□□ 0.27
SMN2-201ENST00000380741 LINC00303Q3SY05 128 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 TMEM164Q5U3C3 297 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 NLRP8Q86W28 1048 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 GALNT13Q8IUC8 556 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 KCTD6Q8NC69 237 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 ARRDC2Q8TBH0 407 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 FATE1Q969F0 183 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 PMEPA1Q969W9 287 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 COX14Q96I36 57 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 TSGA13Q96PP4 275 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 RIOK2Q9BVS4 552 aaKnown RBP16.76■□□□□ 0.27
SMN2-201ENST00000380741 B3GNT4Q9C0J1 378 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 AMACRQ9UHK6 382 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 NENFQ9UMX5 172 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 LUC7L2Q9Y383 392 aaKnown RBP16.76■□□□□ 0.27
SMN2-201ENST00000380741 PCDHB11Q9Y5F2 797 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 PCDHGA4Q9Y5G9 962 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 MYO18BQ8IUG5 2567 aa16.76■□□□□ 0.27
SMN2-201ENST00000380741 TLN1Q9Y490 2541 aaKnown RBP16.75■□□□□ 0.27
SMN2-201ENST00000380741 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.75■□□□□ 0.27
SMN2-201ENST00000380741 CLDN7O95471 211 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 GYPCP04921 128 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 ITGB2P05107 769 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 FGF3P11487 239 aaPredicted RBP16.75■□□□□ 0.27
SMN2-201ENST00000380741 CES1P23141 567 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 MPSTP25325 297 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 ARSDP51689 593 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 GBE1Q04446 702 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 NIPAL4Q0D2K0 466 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 ZNF761Q86XN6 746 aaPredicted RBP16.75■□□□□ 0.27
SMN2-201ENST00000380741 NRSN1Q8IZ57 195 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 LPCAT1Q8NF37 534 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 OR4D9Q8NGE8 314 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 EXD1Q8NHP7 514 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 EXTL1Q92935 676 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 FAF2Q96CS3 445 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 IQCDQ96DY2 449 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 PCDH9Q9HC56 1237 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 KCNK4Q9NYG8 393 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 TMEM9Q9P0T7 183 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 CTTNBP2NLQ9P2B4 639 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 DNPEPQ9ULA0 475 aa16.75■□□□□ 0.27
SMN2-201ENST00000380741 PCYT1BQ9Y5K3 369 aaPredicted RBP16.75■□□□□ 0.27
SMN2-201ENST00000380741 SPTA1P02549 2419 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 TRBV23OR9-2A0A075B6M9 112 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 STMND1H3BQB6 276 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 PROSCO94903 275 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 ASMTLO95671 621 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 EML2O95834 649 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 ATP1A1P05023 1023 aaKnown RBP16.74■□□□□ 0.27
SMN2-201ENST00000380741 THRAP10827 490 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 CA4P22748 312 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 FASLGP48023 281 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 SQSTM1Q13501 440 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 TRA2AQ13595 282 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMN2-201ENST00000380741 LRP8Q14114 963 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 PDK2Q15119 407 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 PQLC3Q8N755 202 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 SLC37A2Q8TED4 501 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 JPH3Q8WXH2 748 aaPredicted RBP16.74■□□□□ 0.27
SMN2-201ENST00000380741 TAAR9Q96RI9 348 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 LYSMD1Q96S90 227 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 HAUS2Q9NVX0 235 aa16.74■□□□□ 0.27
SMN2-201ENST00000380741 OAS3Q9Y6K5 1087 aaKnown RBP16.74■□□□□ 0.27
SMN2-201ENST00000380741 C1orf232A0A0U1RR37 186 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 PYCARD-AS1I3L0S3 204 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 SLC28A2O43868 658 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 DNAJC6O75061 913 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 CASP14P31944 242 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 RPL26P61254 145 aaKnown RBP16.73■□□□□ 0.27
SMN2-201ENST00000380741 CYP4F2P78329 520 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 GPLD1P80108 840 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 SLC10A2Q12908 348 aaPredicted RBP16.73■□□□□ 0.27
SMN2-201ENST00000380741 MAP7D3Q8IWC1 876 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 RAVER1Q8IY67 606 aaKnown RBP16.73■□□□□ 0.27
SMN2-201ENST00000380741 SFRP1Q8N474 314 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 ZSCAN1Q8NBB4 408 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 AGBL5Q8NDL9 886 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 WDR24Q96S15 920 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 ARHGAP9Q9BRR9 750 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms